CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PZF1
(
Saccharomyces cerevisiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YPR186C
T131860_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PZF1
M08548_2.00
Saccharomyces cerevisiae
TGTAGTGGGTGACC
GGTCACCCACTACA
Misc
DeBoer et al.(2011)
YPR186C_1321
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YPR186C
C2H2 ZF
49
74
YFCDYDGCDKAFTRPSILTEHQLSVH
YPR186C
C2H2 ZF
80
102
FQCDKCAKSFVKKSHLERHLYTH
YPR186C
C2H2 ZF
108
130
FQCSYCGKGVTTRQQLKRHEVTH
YPR186C
C2H2 ZF
134
159
FICPEEGCNLRFYKHPQLRAHILSVH
YPR186C
C2H2 ZF
163
186
LTCPHCNKSFQRPYRLRNHISKHH
YPR186C
C2H2 ZF
194
219
YQCTFAGCCKEFRIWSQLQSHIKNDH
YPR186C
C2H2 ZF
222
244
LKCPICSKPCVGENGLQMHMIIH
YPR186C
C2H2 ZF
253
277
WKCHICPDMSFSRKHDLLTHYGSIH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces cerevisiae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
22737_YPR186C
Saccharomyces paradoxus
22737_YPR186C
I
0.822
22948_YPR186C
Saccharomyces mikatae
22948_YPR186C
I
0.812
SKUD_152903
Saccharomyces kudriavzevii
SKUD_152903
I
0.805
26175_YPR186C
Saccharomyces bayanus
26175_YPR186C
I
0.794