23118_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23118_Multiple T390829_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS1
M00078_2.00 		Saccharomyces cerevisiae
GCGGCSGD
HCSGCCGC		 PBM
Badis et al.(2008)
RDS1_2068 		0.620 0.769
RDS1
M01573_2.00 		Saccharomyces cerevisiae
NKCGGVNNNN
NNNNBCCGMN		 PBM
Zhu et al.(2009)
Rds1 		0.620 0.769
RDS1
M07505_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0361.1 		0.620 0.769
RDS1
M08648_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 Misc
DeBoer et al.(2011)
YCR106W_506 		0.620 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23118_Multiple Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_01864 Schistosoma haematobium A_01864 N
D915_07817 Fasciola hepatica D915_07817 N
ECPE_0001819101 Echinostoma caproni ECPE_0001819101 N
PXEA_0002606301 Protopolystoma xenopodis PXEA_0002606301 N
SCUD_0000389801 Schistosoma curassoni SCUD_0000389801 N
Sjc_0090020 Schistosoma japonicum Sjc_0090020 N
Smp_067520 Schistosoma mansoni Smp_067520 N
SMRZ_0001234701 Schistosoma margrebowiei SMRZ_0001234701 N
SMTD_0001581901 Schistosoma mattheei SMTD_0001581901 N
SROB_0001468701 Schistosoma rodhaini SROB_0001468701 N
T265_13129 Opisthorchis viverrini T265_13129 N
TRE_0001024701 Trichobilharzia regenti TRE_0001024701 N