23118_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23118_Multiple T390829_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS1
M00078_2.00 		Saccharomyces cerevisiae
GCGGCSGD
HCSGCCGC		 PBM
Badis et al.(2008)
RDS1_2068 		0.620 0.769
RDS1
M01573_2.00 		Saccharomyces cerevisiae
NKCGGVNNNN
NNNNBCCGMN		 PBM
Zhu et al.(2009)
Rds1 		0.620 0.769
RDS1
M07505_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0361.1 		0.620 0.769
RDS1
M08648_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 Misc
DeBoer et al.(2011)
YCR106W_506 		0.620 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23118_Multiple Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
23122_Multiple Saccharomyces mikatae 23122_Multiple I 0.683
761_YCR106W Saccharomyces paradoxus 761_YCR106W I 0.649
RDS1 Saccharomyces cerevisiae YCR106W D 0.620