Bo6g073020 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g073020 T000862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.800 0.960
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.759 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.690 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g073020.1 AP2 20 71

Links

Other AP2 family TFs
Other Brassica oleracea TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS03G0657400 Oryza sativa OS03G0657400 N 0.000
SapurV1A.0081s0610 Salix purpurea SapurV1A.0081s0610 N 0.000
Pavir.J22786 Panicum virgatum Pavir.J22786 N 0.000
orange1.1g032690m.g Citrus sinensis orange1.1g032690m.g N 0.000
gene01596-v1.0-hybrid Fragaria vesca gene01596-v1.0-hybrid N 0.000
Eucgr.J01756 Eucalyptus grandis Eucgr.J01756 N 0.000
Ciclev10017173m.g Citrus clementina Ciclev10017173m.g N 0.000
cassava10020.m1 Manihot esculenta cassava10020.m1 N 0.000
TRIUR3_13881 Triticum urartu TRIUR3_13881 N 0.000
Traes_4DS_CFC487CE5 Triticum aestivum Traes_4DS_CFC487CE5 N 0.000
Traes_4AL_234E1CDF6 Triticum aestivum Traes_4AL_234E1CDF6 N 0.000
Si038955m.g Setaria italica Si038955m.g N 0.000
Si038001m.g Setaria italica Si038001m.g N 0.000
Sb01g012870 Sorghum bicolor Sb01g012870 N 0.000
POPTR_0003s20860 Populus trichocarpa POPTR_0003s20860 N 0.000
POPTR_0001s03970 Populus trichocarpa POPTR_0001s03970 N 0.000
AMTR_s00004p00067720 Amborella trichopoda AMTR_s00004p00067720 N 0.000
ORUFI03G29320 Oryza rufipogon ORUFI03G29320 N 0.000
ORGLA03G0260500 Oryza glaberrima ORGLA03G0260500 N 0.000
OPUNC03G25700 Oryza punctata OPUNC03G25700 N 0.000
ONIVA03G29220 Oryza nivara ONIVA03G29220 N 0.000
OMERI03G24810 Oryza meridionalis OMERI03G24810 N 0.000
OGLUM03G28820 Oryza glumaepatula OGLUM03G28820 N 0.000
OBART03G28190 Oryza barthii OBART03G28190 N 0.000
OB03G35830 Oryza brachyantha OB03G35830 N 0.000
LPERR03G23380 Leersia perrieri LPERR03G23380 N 0.000
GSMUA_Achr3G30880_001 Musa acuminata GSMUA_Achr3G30880_001 N 0.000
GRMZM2G161411 Zea mays GRMZM2G161411 N 0.000
GRMZM2G149219 Zea mays GRMZM2G149219 N 0.000
F775_42487 Aegilops tauschii F775_42487 N 0.000
BRADI1G13207 Brachypodium distachyon BRADI1G13207 N 0.000
BGIOSGA010118 Oryza indica BGIOSGA010118 N 0.000