GSMUA_Achr8G09350_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr8G09350_001 T002465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.691 0.738
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.691 0.738
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.691 0.748
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.691 0.748
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.685 0.738
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.685 0.738
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P09350_001 AP2 60 120
GSMUA_Achr8P09350_001 AP2 162 214

Links

Other AP2 family TFs
Other Musa acuminata TFs

453 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPPYG00000016868 Pongo abelii ENSPPYG00000016868 N
ENSSTOG00000027359 Ictidomys tridecemlineatus ENSSTOG00000027359 N
SIM1 Sus scrofa ENSSSCG00000004357 N
ENSSHAG00000016220 Sarcophilus harrisii ENSSHAG00000016220 N
SIM1 Sorex araneus ENSSARG00000000736 N
Sim1 Rattus norvegicus ENSRNOG00000037600 N
SIM1 Pteropus vampyrus ENSPVAG00000012822 N
SIM1 Pan troglodytes ENSPTRG00000018447 N
ENSPSIG00000002579 Pelodiscus sinensis ENSPSIG00000002579 N
SIM1 Tupaia belangeri ENSTBEG00000005949 N
SIM1 Procavia capensis ENSPCAG00000008763 N
ENSPANG00000011218 Papio anubis ENSPANG00000011218 N
SIM1 Ochotona princeps ENSOPRG00000013168 N
ENSONIG00000016544 Oreochromis niloticus ENSONIG00000016544 N
ENSONIG00000014696 Oreochromis niloticus ENSONIG00000014696 N
SIM1 Otolemur garnettii ENSOGAG00000009865 N
SIM1 Oryctolagus cuniculus ENSOCUG00000002759 N
ENSOARG00000011739 Ovis aries ENSOARG00000011739 N
Aan_R007898 Calypte anna Aan_R007898 N
Myotis_brandtii_SIM1_10034719 Myotis brandtii Myotis_brandtii_SIM1_10034719 N
Gfo_R003852 Geospiza fortis Gfo_R003852 N
ENSP00000358210-D1 Bos grunniens ENSP00000358210-D1 N
ENSP00000262901 Macaca fascicularis ENSP00000262901 N
Cmyd_10020168 Chelonia mydas Cmyd_10020168 N
Brh_R001528 Buceros rhinoceros Brh_R001528 N
Alligator_sinensis_CCG004879.1 Alligator sinensis Alligator_sinensis_CCG004879.1 N
Afo_R003668 Aptenodytes forsteri Afo_R003668 N
SIM1 Ornithorhynchus anatinus ENSOANG00000008943 N
ENSXMAG00000019075 Xiphophorus maculatus ENSXMAG00000019075 N
SIM1 Vicugna pacos ENSVPAG00000001407 N
SIM1 Tursiops truncatus ENSTTRG00000008248 N
ENSTSYG00000007116 Tarsius syrichta ENSTSYG00000007116 N
sim1b Takifugu rubripes ENSTRUG00000018267 N
ENSTNIG00000019722 Tetraodon nigroviridis ENSTNIG00000019722 N
sim1b Tetraodon nigroviridis ENSTNIG00000012304 N
SIM1 Taeniopygia guttata ENSTGUG00000012278 N
sim1a Danio rerio ENSDARG00000023316 N
SIM1 Homo sapiens ENSG00000112246 N
SIM1 Felis catus ENSFCAG00000005942 N
ENSFALG00000005247 Ficedula albicollis ENSFALG00000005247 N
SIM1 Echinops telfairi ENSETEG00000010692 N
SIM1 Erinaceus europaeus ENSEEUG00000009806 N
SIM1 Equus caballus ENSECAG00000009161 N
ENSDORG00000008569 Dipodomys ordii ENSDORG00000008569 N
SIM1 Dasypus novemcinctus ENSDNOG00000010261 N
sim1b Gasterosteus aculeatus ENSGACG00000009479 N
ENSCSAG00000014652 Chlorocebus sabaeus ENSCSAG00000014652 N
SIM1 Callithrix jacchus ENSCJAG00000001495 N
SIM1 Choloepus hoffmanni ENSCHOG00000005099 N
SIM1 Canis familiaris ENSCAFG00000003538 N
SIM1 Bos taurus ENSBTAG00000002294 N
ENSAPLG00000012534 Anas platyrhynchos ENSAPLG00000012534 N
ENSAMXG00000001377 Astyanax mexicanus ENSAMXG00000001377 N
ENSAMEG00000014765 Ailuropoda melanoleuca ENSAMEG00000014765 N
ENSLOCG00000016561 Lepisosteus oculatus ENSLOCG00000016561 N
ENSNLEG00000013870 Nomascus leucogenys ENSNLEG00000013870 N
Sim1 Mus musculus ENSMUSG00000019913 N
ENSMPUG00000001668 Mustela putorius furo ENSMPUG00000001668 N
SIM1 Monodelphis domestica ENSMODG00000018087 N
SIM1 Macaca mulatta ENSMMUG00000022285 N
SIM1 Myotis lucifugus ENSMLUG00000002874 N
SIM1 Microcebus murinus ENSMICG00000008851 N
ENSMEUG00000011682 Macropus eugenii ENSMEUG00000011682 N
SIM1 Anolis carolinensis ENSACAG00000010256 N
SIM1 Loxodonta africana ENSLAFG00000006594 N
ENSLACG00000015924 Latimeria chalumnae ENSLACG00000015924 N
ENSGMOG00000018211 Gadus morhua ENSGMOG00000018211 N
ENSGMOG00000006637 Gadus morhua ENSGMOG00000006637 N
SIM1 Gorilla gorilla ENSGGOG00000017108 N
SIM1 Gallus gallus ENSGALG00000015466 N
sim1a Gasterosteus aculeatus ENSGACG00000014149 N