PGSC0003DMG400018352 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400018352 T004441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.825 0.920
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.818 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.818 0.920
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.685 0.800
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.685 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400047265 AP2 182 233

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV11_06930 Exophiala sideris PV11_06930 N 0.000
PMAA_082550 Talaromyces marneffei PMAA_082550 N 0.000
PV04_08134 Capronia semiimmersa PV04_08134 N 0.000
PV05_08566 Exophiala xenobiotica PV05_08566 N 0.000
PV06_09975 Exophiala oligosperma PV06_09975 N 0.000
PV07_11857 Cladophialophora immunda PV07_11857 N 0.000
PV08_08390 Exophiala spinifera PV08_08390 N 0.000
PV09_03952 Verruconis gallopava PV09_03952 N 0.000
PV10_08232 Exophiala mesophila PV10_08232 N 0.000
PFICI_03421 Pestalotiopsis fici PFICI_03421 N 0.000
SEPMUDRAFT_150769 Sphaerulina musiva SEPMUDRAFT_150769 N 0.000
SPBR_02521 Sporothrix brasiliensis SPBR_02521 N 0.000
SPBR_06706 Sporothrix brasiliensis SPBR_06706 N 0.000
TSTA_117390 Talaromyces stipitatus TSTA_117390 N 0.000
X797_008429 Metarhizium robertsii X797_008429 N 0.000
Z518_06873 Rhinocladiella mackenziei Z518_06873 N 0.000
Z519_01369 Cladophialophora bantiana Z519_01369 N 0.000
PMAA_082550 Penicillium marneffei PMAA_082550 N 0.000
HMPREF1541_03976 Cyphellophora europaea HMPREF1541_03976 N 0.000
A1O3_09122 Capronia epimyces A1O3_09122 N 0.000
A1O5_02111 Cladophialophora psammophila A1O5_02111 N 0.000
A1O7_07661 Cladophialophora yegresii A1O7_07661 N 0.000
A1O9_12701 Exophiala aquamarina A1O9_12701 N 0.000
BAUCODRAFT_75640 Baudoinia compniacensis BAUCODRAFT_75640 N 0.000
BBA_08755 Beauveria bassiana BBA_08755 N 0.000
DOTSEDRAFT_71961 Dothistroma septosporum DOTSEDRAFT_71961 N 0.000
G647_02424 Cladophialophora carrionii G647_02424 N 0.000
A1O3_06639 Capronia epimyces A1O3_06639 N 0.000
HMPREF1624_01047 Sporothrix schenckii HMPREF1624_01047 N 0.000
HMPREF1624_02633 Sporothrix schenckii HMPREF1624_02633 N 0.000
MAJ_09511 Metarhizium majus MAJ_09511 N 0.000
MANI_018902 Metarhizium anisopliae MANI_018902 N 0.000
MBR_10279 Metarhizium brunneum MBR_10279 N 0.000
MGU_07913 Metarhizium guizhouense MGU_07913 N 0.000
MYCFIDRAFT_167080 Pseudocercospora fijiensis MYCFIDRAFT_167080 N 0.000