CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g030310
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb02g030310
T004969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.719
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g030310.1
AP2
64
116
PVYRGVRRRGAAGRWVCEVRVPGKRGARLWLGTYLAAESAARAHDAAMLALGR
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036435
Oryza indica
BGIOSGA036435
N
0.000
BRADI4G40020
Brachypodium distachyon
BRADI4G40020
N
0.000
MLOC_38921
Hordeum vulgare
MLOC_38921
N
0.000
OB12G16010
Oryza brachyantha
OB12G16010
N
0.000
OGLUM12G07580
Oryza glumaepatula
OGLUM12G07580
N
0.000
ONIVA12G05970
Oryza nivara
ONIVA12G05970
N
0.000
OPUNC12G06140
Oryza punctata
OPUNC12G06140
N
0.000
ORGLA12G0060700
Oryza glaberrima
ORGLA12G0060700
N
0.000
OS12G0225300
Oryza sativa
OS12G0225300
N
0.000
Sb08g001435
Sorghum bicolor
Sb08g001435
N
0.000
Traes_5AS_1986BD81F
Triticum aestivum
Traes_5AS_1986BD81F
N
0.000
Traes_5BS_96DCE1858
Triticum aestivum
Traes_5BS_96DCE1858
N
0.000
Traes_5DS_61EE28B2A
Triticum aestivum
Traes_5DS_61EE28B2A
N
0.000
TRIUR3_17567
Triticum urartu
TRIUR3_17567
N
0.000
Pavir.J33683
Panicum virgatum
Pavir.J33683
N
0.000