Pavir.J33683 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J33683 T181875_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J33683.1.p FAR1 80 172
Pavir.J33683.2.p FAR1 80 172
Pavir.J33683.3.p FAR1 80 172
Pavir.J33683.4.p FAR1 80 172
Pavir.J33683.5.p FAR1 80 172
Pavir.J33683.6.p FAR1 80 172

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Cb01881 Panicum virgatum Pavir.Cb01881 N 1.000
Sb08g001435 Sorghum bicolor Sb08g001435 N 0.978
BRADI4G40020 Brachypodium distachyon BRADI4G40020 N 0.899
Traes_5BS_96DCE1858 Triticum aestivum Traes_5BS_96DCE1858 N 0.886
Traes_5DS_61EE28B2A Triticum aestivum Traes_5DS_61EE28B2A N 0.876
OB12G16010 Oryza brachyantha OB12G16010 N 0.875
MLOC_38921 Hordeum vulgare MLOC_38921 N 0.843
BGIOSGA036435 Oryza indica BGIOSGA036435 N 0.831
OGLUM12G07580 Oryza glumaepatula OGLUM12G07580 N 0.831
ONIVA12G05970 Oryza nivara ONIVA12G05970 N 0.831
OPUNC12G06140 Oryza punctata OPUNC12G06140 N 0.831
ORGLA12G0060700 Oryza glaberrima ORGLA12G0060700 N 0.831
OS12G0225300 Oryza sativa OS12G0225300 N 0.831
Traes_5AS_1986BD81F Triticum aestivum Traes_5AS_1986BD81F N 0.831
TRIUR3_17567 Triticum urartu TRIUR3_17567 N 0.831