CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc04g049800.2
(
Solanum lycopersicum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Solyc04g049800.2
T005454_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc04g049800.2.1
AP2
111
160
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Solyc04g049800.2.1
AP2
203
247
SKYRGVTLHKCGRWEGQFIGKKAYDKCDGREAVTNFVASTYEREK
Links
Other
AP2
family TFs
Other
Solanum lycopersicum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G07980
Glycine max
GLYMA05G07980
I
scaffold_104540.1
Arabidopsis lyrata
scaffold_104540.1
I
Solyc03g119740.2
Solanum lycopersicum
Solyc03g119740.2
I
TCM_012262
Theobroma cacao
TCM_012262
I
VIT_17s0000g04130
Vitis vinifera
VIT_17s0000g04130
I
30174.m008717
Ricinus communis
30174.m008717
I
Ciclev10021342m.g
Citrus clementina
Ciclev10021342m.g
I
Eucgr.K02659
Eucalyptus grandis
Eucgr.K02659
I
gene26214-v1.0-hybrid
Fragaria vesca
gene26214-v1.0-hybrid
I
Gorai.006G063000
Gossypium raimondii
Gorai.006G063000
I
mgf017230m
Mimulus guttatus
mgf017230m
N
Aquca_026_00199
Aquilegia coerulea
Aquca_026_00199
N