CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc04g049800.2
(
Solanum lycopersicum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Solyc04g049800.2
T005454_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc04g049800.2.1
AP2
111
160
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Solyc04g049800.2.1
AP2
203
247
SKYRGVTLHKCGRWEGQFIGKKAYDKCDGREAVTNFVASTYEREK
Links
Other
AP2
family TFs
Other
Solanum lycopersicum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.721
TCM_043051
Theobroma cacao
TCM_043051
N
0.705
Bo3g040110
Brassica oleracea
Bo3g040110
N
0.685
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.685
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.685
TCM_022077
Theobroma cacao
TCM_022077
I
0.685
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.684
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.681
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.681
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
0.681
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.679
Bostr.27991s0069
Boechera stricta
Bostr.27991s0069
N
0.678
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.678
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.677