MTR_2g093060 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_2g093060 T002819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.856 0.949
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.844 0.949
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.841 0.960
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.812 0.838
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES67388 AP2 133 183
AES67388 AP2 225 276
KEH39304 AP2 133 183
KEH39304 AP2 225 275
KEH39305 AP2 133 183
KEH39305 AP2 225 276

Links

Other AP2 family TFs
Other Medicago truncatula TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.868
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.865
Ca_02499 Cicer arietinum Ca_02499 I 0.865
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.865
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.864
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.864
28752.m000339 Ricinus communis 28752.m000339 I 0.864
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.863
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.863
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.863
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.863
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.863
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.863
OS05G0121600 Oryza sativa OS05G0121600 I 0.863
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.863
Si025305m.g Setaria italica Si025305m.g I 0.863
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.863
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.863
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.863
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.863
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.863
MDP0000200319 Malus domestica MDP0000200319 I 0.863
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.863
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.863
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.863
PK07183.1 Cannabis sativa PK07183.1 I 0.863
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.863
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.863
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.862
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.862
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.862
TCM_022077 Theobroma cacao TCM_022077 I 0.862
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.862
Pm002492 Prunus mume Pm002492 I 0.862
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.862
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.862
Cla018124 Citrullus lanatus Cla018124 I 0.861
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.861
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.860
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.860
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.859
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.858
F775_32962 Aegilops tauschii F775_32962 I 0.858
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.858
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.858
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.858
TCM_042000 Theobroma cacao TCM_042000 I 0.858
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.858
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.858
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.858
Pm000974 Prunus mume Pm000974 I 0.858
29805.m001494 Ricinus communis 29805.m001494 I 0.858
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.858
MDP0000181606 Malus domestica MDP0000181606 I 0.858
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.857
AP2 Arabidopsis thaliana AT4G36920 I 0.856
Bo1g004960 Brassica oleracea Bo1g004960 I 0.856
Bo7g118400 Brassica oleracea Bo7g118400 I 0.856
Bra011741 Brassica rapa Bra011741 I 0.856
Bra017809 Brassica rapa Bra017809 I 0.856
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.856
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.856
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.856
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.856
Ca_09295 Cicer arietinum Ca_09295 I 0.856
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.856
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.856
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.856
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.856
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.855
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.855
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.855
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.855
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.855
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.855
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.855
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.855
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.855
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.855
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.855
Cla000716 Citrullus lanatus Cla000716 I 0.855
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.855
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.855
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.855
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.855
PK02403.1 Cannabis sativa PK02403.1 I 0.855
mgf009315m Mimulus guttatus mgf009315m I 0.854
mgf021945m Mimulus guttatus mgf021945m I 0.854
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.854
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.854
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.852
TCM_000665 Theobroma cacao TCM_000665 I 0.852
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.852
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.851
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.850
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.847
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.847
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.847
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.847
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.847
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.847
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.847
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.847
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.847
Si012635m.g Setaria italica Si012635m.g I 0.847
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.846
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.846
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.846
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.845
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.845
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.845
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.844
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.844
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.844
Si036068m.g Setaria italica Si036068m.g I 0.844
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.844
29169.m000017 Ricinus communis 29169.m000017 I 0.844
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.844
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.844
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.844
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.844
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.843
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.843
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.843
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.843
Ca_12010 Cicer arietinum Ca_12010 I 0.843
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.842
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.842
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.841
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.841
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.841
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.841
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.841
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.841
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.841
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.840
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.840
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.839
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.839
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.839
OBART07G08110 Oryza barthii OBART07G08110 I 0.839
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.839
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.839
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.839
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.839
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.839
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.839
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.839
OS07G0235800 Oryza sativa OS07G0235800 I 0.839
MDP0000137561 Malus domestica MDP0000137561 I 0.839
Bo4g070350 Brassica oleracea Bo4g070350 I 0.838
Bra011939 Brassica rapa Bra011939 I 0.838
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.838
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.838
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.838
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.838
Ca_14618 Cicer arietinum Ca_14618 I 0.838
Pm030172 Prunus mume Pm030172 I 0.838
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.838
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.838
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.837
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.837
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.836
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.836
Si029636m.g Setaria italica Si029636m.g I 0.836
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.836
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.836
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.836
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.835
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.835
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.835
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.835
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.835
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.835
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.835
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.835
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.834
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.834
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.833
OB06G29960 Oryza brachyantha OB06G29960 I 0.833
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.833
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.833
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.833
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.833
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.832
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.832
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.831
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.830
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.829
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.827
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.827
OB03G45870 Oryza brachyantha OB03G45870 I 0.827
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.824
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.822
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.821
mgf005133m Mimulus guttatus mgf005133m I 0.820
mgf010466m Mimulus guttatus mgf010466m I 0.820
MDP0000163645 Malus domestica MDP0000163645 I 0.819
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.819
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.818
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.818
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.818
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.817
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.815
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.815
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.814
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.812
P93632_MAIZE Zea mays P93632_MAIZE D 0.812
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.812
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.812
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.811
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.810
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.810
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.809
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.808
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.805
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
TOE3 Arabidopsis thaliana AT5G67180 I 0.804
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.804
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.804
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.804
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.804
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.803
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.800
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.799
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.799
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.799
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.799
Bo7g064000 Brassica oleracea Bo7g064000 I 0.798
Bra012139 Brassica rapa Bra012139 I 0.798
OS03G0818800 Oryza sativa OS03G0818800 I 0.794
Cla020549 Citrullus lanatus Cla020549 I 0.794
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.794
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.784
Cla018549 Citrullus lanatus Cla018549 I 0.779
TCM_043051 Theobroma cacao TCM_043051 N 0.736
Solyc09g007260.2 Solanum lycopersicum Solyc09g007260.2 N 0.722
Solyc04g049800.2 Solanum lycopersicum Solyc04g049800.2 N 0.721
Bo3g040110 Brassica oleracea Bo3g040110 N 0.715
OGLUM05G01570 Oryza glumaepatula OGLUM05G01570 N 0.715
OMERI05G01620 Oryza meridionalis OMERI05G01620 N 0.715
ONIVA05G01600 Oryza nivara ONIVA05G01600 N 0.715
ORUFI05G01620 Oryza rufipogon ORUFI05G01620 N 0.715
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.712
Bostr.27991s0069 Boechera stricta Bostr.27991s0069 N 0.710
RAP2.7 Arabidopsis lyrata fgenesh2_kg.4__825__AT2G28550.1 N 0.706
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.702
Si006371m.g Setaria italica Si006371m.g I 0.700
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.687
Cla013460 Citrullus lanatus Cla013460 N 0.687