ORGLA07G0068600 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA07G0068600 T003928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.838 0.949
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.833 0.919
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.824 0.939
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.790 0.818
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA07G0068600.1 AP2 121 171
ORGLA07G0068600.1 AP2 213 264

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.864
OBART07G08110 Oryza barthii OBART07G08110 I 0.864
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.864
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.864
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.864
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.864
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.864
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.864
OS07G0235800 Oryza sativa OS07G0235800 I 0.864
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.863
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.862
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.860
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.860
Si029636m.g Setaria italica Si029636m.g I 0.860
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.860
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.859
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.859
Si036068m.g Setaria italica Si036068m.g I 0.859
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.859
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.859
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.857
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.857
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.857
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.857
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.857
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.857
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.853
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.852
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.852
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.850
OB03G45870 Oryza brachyantha OB03G45870 I 0.849
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.846
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.844
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.844
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.843
Ca_02499 Cicer arietinum Ca_02499 I 0.843
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.843
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.843
MDP0000200319 Malus domestica MDP0000200319 I 0.843
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.842
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.842
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.842
TCM_022077 Theobroma cacao TCM_022077 I 0.842
Cla018124 Citrullus lanatus Cla018124 I 0.842
28752.m000339 Ricinus communis 28752.m000339 I 0.842
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.842
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.842
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.842
PK07183.1 Cannabis sativa PK07183.1 I 0.842
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.841
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.841
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.841
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.841
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.841
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.841
OS05G0121600 Oryza sativa OS05G0121600 I 0.841
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.841
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.841
Si025305m.g Setaria italica Si025305m.g I 0.841
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.841
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.841
Pm002492 Prunus mume Pm002492 I 0.841
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.841
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.841
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.841
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.841
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.841
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.841
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.841
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.841
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.841
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.840
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.840
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.839
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.839
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.839
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.838
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.838
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.838
TCM_000665 Theobroma cacao TCM_000665 I 0.838
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.838
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.838
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.838
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.838
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.838
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.837
29805.m001494 Ricinus communis 29805.m001494 I 0.837
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.836
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.836
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.836
Pm000974 Prunus mume Pm000974 I 0.836
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.836
MDP0000181606 Malus domestica MDP0000181606 I 0.836
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.835
F775_32962 Aegilops tauschii F775_32962 I 0.835
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.835
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.835
TCM_042000 Theobroma cacao TCM_042000 I 0.835
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.835
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.835
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.835
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.835
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.835
Bo4g070350 Brassica oleracea Bo4g070350 I 0.834
Bra011939 Brassica rapa Bra011939 I 0.834
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.834
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.834
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.834
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.834
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.834
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.834
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.834
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.834
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.834
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.834
Cla000716 Citrullus lanatus Cla000716 I 0.834
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.834
mgf009315m Mimulus guttatus mgf009315m I 0.834
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.834
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.834
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.834
PK02403.1 Cannabis sativa PK02403.1 I 0.834
AP2 Arabidopsis thaliana AT4G36920 I 0.833
Bo1g004960 Brassica oleracea Bo1g004960 I 0.833
Bo7g118400 Brassica oleracea Bo7g118400 I 0.833
Bra011741 Brassica rapa Bra011741 I 0.833
Bra017809 Brassica rapa Bra017809 I 0.833
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.833
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.833
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.833
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.833
Ca_09295 Cicer arietinum Ca_09295 I 0.833
Ca_14618 Cicer arietinum Ca_14618 I 0.833
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.833
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.833
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.833
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.833
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.833
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.833
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.832
mgf021945m Mimulus guttatus mgf021945m I 0.832
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.832
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.831
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.831
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.831
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.831
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.831
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.831
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.831
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.831
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.831
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.831
Si012635m.g Setaria italica Si012635m.g I 0.831
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.830
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.830
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.828
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.827
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.825
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.825
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.824
29169.m000017 Ricinus communis 29169.m000017 I 0.824
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.824
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.824
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.824
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.823
Ca_12010 Cicer arietinum Ca_12010 I 0.823
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.823
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.823
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.821
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.820
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.820
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.820
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.819
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.819
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.818
Pm030172 Prunus mume Pm030172 I 0.818
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.818
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.818
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.817
MDP0000137561 Malus domestica MDP0000137561 I 0.817
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.816
mgf005133m Mimulus guttatus mgf005133m I 0.816
mgf010466m Mimulus guttatus mgf010466m I 0.816
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.815
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.815
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.815
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.815
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.815
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.813
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.813
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.812
OB06G29960 Oryza brachyantha OB06G29960 I 0.812
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.812
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.812
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.812
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.812
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.812
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.811
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.807
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.807
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.806
MDP0000163645 Malus domestica MDP0000163645 I 0.804
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.802
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.802
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.802
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.799
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.799
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.798
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.798
OS03G0818800 Oryza sativa OS03G0818800 I 0.796
Cla020549 Citrullus lanatus Cla020549 I 0.795
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.795
Bo7g064000 Brassica oleracea Bo7g064000 I 0.793
Bra012139 Brassica rapa Bra012139 I 0.793
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.793
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.790
P93632_MAIZE Zea mays P93632_MAIZE D 0.790
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.789
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.788
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.786
Cla018549 Citrullus lanatus Cla018549 I 0.785
TOE3 Arabidopsis thaliana AT5G67180 I 0.784
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.784
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.784
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.784
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.783
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.783
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.783
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.782
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.782
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.781
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.780
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.777
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.777
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.771
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.701
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.693
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Si006371m.g Setaria italica Si006371m.g I 0.679