Solyc10g080310.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g080310.1 T005529_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.762 0.955
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.753 0.932
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g080310.1.1 AP2 28 73

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_20244 Ancylostoma caninum ANCCAN_20244 N 0.000
ANCCEY_12709 Ancylostoma ceylanicum ANCCEY_12709 N 0.000
ANCDUO_04672 Ancylostoma duodenale ANCDUO_04672 N 0.000
CGOC_0001417301 Cylicostephanus goldi CGOC_0001417301 N 0.000
Hba_13962 Heterorhabditis bacteriophora Hba_13962 N 0.000
HPBE_0001223101 Heligmosomoides bakeri HPBE_0001223101 N 0.000
L596_g5733 Steinernema carpocapsae L596_g5733 N 0.000
NECAME_13995 Necator americanus NECAME_13995 N 0.000
OESDEN_00841 Oesophagostomum dentatum OESDEN_00841 N 0.000
OESDEN_22889 Oesophagostomum dentatum OESDEN_22889 N 0.000
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 N 0.000