Cla012194 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla012194 T006460_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.706 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012194 AP2 71 131

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB07G23510 Oryza brachyantha OB07G23510 N
OBART07G17630 Oryza barthii OBART07G17630 N
OGLUM07G17270 Oryza glumaepatula OGLUM07G17270 N
OLONG_014592 Oryza longistaminata OLONG_014592 N
OMERI07G14510 Oryza meridionalis OMERI07G14510 N
ONIVA07G15940 Oryza nivara ONIVA07G15940 N
OPUNC07G16420 Oryza punctata OPUNC07G16420 N
ORGLA07G0141300 Oryza glaberrima ORGLA07G0141300 N
ORUFI07G18300 Oryza rufipogon ORUFI07G18300 N
OS07G0543000 Oryza sativa OS07G0543000 N
PGSC0003DMG400021717 Solanum tuberosum PGSC0003DMG400021717 N
Sb02g035580 Sorghum bicolor Sb02g035580 N
Si030877m.g Setaria italica Si030877m.g N
Solyc02g079970.2 Solanum lycopersicum Solyc02g079970.2 N
Pavir.Ba00731 Panicum virgatum Pavir.Ba00731 N
Pavir.J35704 Panicum virgatum Pavir.J35704 N