27810.m000639 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 27810.m000639 T006677_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.815 0.980
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.765 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.685 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
27810.m000639 AP2 28 79

Links

Other AP2 family TFs
Other Ricinus communis TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_02746 Schistosoma haematobium A_02746 I
TsM_000945000 Taenia solium TsM_000945000 I
TRE_0000636201 Trichobilharzia regenti TRE_0000636201 I
TASK_0000025401 Taenia asiatica TASK_0000025401 I
T265_00953 Opisthorchis viverrini T265_00953 I
SMTD_0000660301 Schistosoma mattheei SMTD_0000660301 I
SMRZ_0001749101 Schistosoma margrebowiei SMRZ_0001749101 I
SCUD_0001558401 Schistosoma curassoni SCUD_0001558401 I
MCOS_0000023201 Mesocestoides corti MCOS_0000023201 I
EmuJ_000624300 Echinococcus multilocularis EmuJ_000624300 I
ECANG7_04949 Echinococcus canadensis ECANG7_04949 I
D915_08809 Fasciola hepatica D915_08809 I
csin111822 Clonorchis sinensis csin111822 I
BGIBMGA012033 Bombyx mori BGIBMGA012033 I
PPAI008462 Phlebotomus papatasi PPAI008462 I
MDOA008767 Musca domestica MDOA008767 I
Smp_022610 Schistosoma mansoni Smp_022610 I
ENSAMXG00000000487 Astyanax mexicanus ENSAMXG00000000487 I
ENSAMXG00000004351 Astyanax mexicanus ENSAMXG00000004351 I
GB42177 Apis mellifera GB42177 I
ISCW019706 Ixodes scapularis ISCW019706 I
KGM_20305 Danaus plexippus KGM_20305 I
MESCA001981 Megaselia scalaris MESCA001981 I
SMAR006929 Strigamia maritima SMAR006929 I
LLOJ001927 Lutzomyia longipalpis LLOJ001927 I
SPU_012008 Strongylocentrotus purpuratus SPU_012008 I
Hsal_01862--XP_001122645.1_APIME Harpegnathos saltator Hsal_01862--XP_001122645.1_APIME I
Sakowv30031408m.g Saccoglossus kowalevskii Sakowv30031408m.g I
LCUP002041 Lucilia cuprina LCUP002041 I
Sjc_0073180 Schistosoma japonicum Sjc_0073180 I
BGLB011346 Biomphalaria glabrata BGLB011346 I
HmN_000549900 Hymenolepis microstoma HmN_000549900 N
HNAJ_0000354001 Hymenolepis nana HNAJ_0000354001 N
HDID_0000251001 Hymenolepis diminuta HDID_0000251001 N
PXEA_0003305101 Protopolystoma xenopodis PXEA_0003305101 N
SCUD_0000499601 Schistosoma curassoni SCUD_0000499601 N
SPER_0001684001 Spirometra erinaceieuropaei SPER_0001684001 N
SMU15030484 Schmidtea mediterranea SMU15030484 N