Cucsa.367300 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.367300 T007111_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.753 0.880
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.753 0.880
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.748 0.880
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.747 0.840
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.747 0.840
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.746 0.860
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.746 0.860
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.738 0.860
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.738 0.860
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.738 0.860
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.738 0.860
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.697 0.800
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.697 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.367300.1 AP2 11 62

Links

Other AP2 family TFs
Other Cucumis sativus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
UCRPA7_3950 Togninia minima UCRPA7_3950 N
PV07_10166 Cladophialophora immunda PV07_10166 N
PV08_06011 Exophiala spinifera PV08_06011 N
PV09_05917 Verruconis gallopava PV09_05917 N
PV10_07538 Exophiala mesophila PV10_07538 N
PV11_08024 Exophiala sideris PV11_08024 N
SAPIO_CDS3171 Scedosporium apiospermum SAPIO_CDS3171 N
SBOR_0088 Sclerotinia borealis SBOR_0088 N
SMAC_04819 Sordaria macrospora SMAC_04819 N
PV05_11133 Exophiala xenobiotica PV05_11133 N
V499_01440 Pseudogymnoascus pannorum V499_01440 N
W97_06158 Coniosporium apollinis W97_06158 N
Z517_08280 Fonsecaea pedrosoi Z517_08280 N
Z518_04016 Rhinocladiella mackenziei Z518_04016 N
Z519_03005 Cladophialophora bantiana Z519_03005 N
aug-scaffold_4.g111 Neurospora discreta aug-scaffold_4.g111 N
NCU16491 Neurospora crassa NCU16491 N
fgenesh1_pg.C_scaffold_4000277 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000277 N
CSUB01_03526 Colletotrichum sublineola CSUB01_03526 N
A1O5_03686 Cladophialophora psammophila A1O5_03686 N
A1O7_00496 Cladophialophora yegresii A1O7_00496 N
A1O9_04841 Exophiala aquamarina A1O9_04841 N
Bcin06g06250 Botrytis cinerea Bcin06g06250 N
CFIO01_01363 Colletotrichum fioriniae CFIO01_01363 N
CGGC5_13848 Colletotrichum gloeosporioides CGGC5_13848 N
CH063_09851 Colletotrichum higginsianum CH063_09851 N
Cob_08011 Colletotrichum orbiculare Cob_08011 N
A1O1_00584 Capronia coronata A1O1_00584 N
EPUS_07706 Endocarpon pusillum EPUS_07706 N
G647_00537 Cladophialophora carrionii G647_00537 N
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N
MBM_04902 Marssonina brunnea MBM_04902 N
MGG_01624 Magnaporthe oryzae MGG_01624 N
NEUTE1DRAFT_134023 Neurospora tetrasperma NEUTE1DRAFT_134023 N
PFICI_01871 Pestalotiopsis fici PFICI_01871 N
PODANS_1_7540 Podospora anserina PODANS_1_7540 N