Cucsa.367300 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.367300 T007111_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.753 0.880
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.753 0.880
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.748 0.880
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.747 0.840
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.747 0.840
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.746 0.860
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.746 0.860
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.738 0.860
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.738 0.860
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.738 0.860
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.738 0.860
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.697 0.800
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.697 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.367300.1 AP2 11 62

Links

Other AP2 family TFs
Other Cucumis sativus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla020550 Citrullus lanatus Cla020550 I 0.813
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.805
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.789
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.789
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.781
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.779
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.778
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.778
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.778
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.778
Cla014175 Citrullus lanatus Cla014175 I 0.767
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.767
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.765
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.765
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.765
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.764
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.763
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.763
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.763
Ca_02170 Cicer arietinum Ca_02170 I 0.763
mgf000289m Mimulus guttatus mgf000289m I 0.763
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.761
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.760
MDP0000125673 Malus domestica MDP0000125673 I 0.760
MDP0000179962 Malus domestica MDP0000179962 I 0.760
TCM_000669 Theobroma cacao TCM_000669 I 0.759
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.759
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.759
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.759
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.759
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.759
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.758
28718.m000038 Ricinus communis 28718.m000038 I 0.758
Bra011744 Brassica rapa Bra011744 I 0.757
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.757
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.757
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.755
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.755
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.755
OBART06G04460 Oryza barthii OBART06G04460 I 0.755
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.755
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.755
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.755
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.755
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.755
OS06G0166400 Oryza sativa OS06G0166400 I 0.755
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.755
MDP0000756341 Malus domestica MDP0000756341 I 0.755
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.755
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.755
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.753
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.753
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.752
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.752
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.752
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.750
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.750
30170.m013843 Ricinus communis 30170.m013843 I 0.750
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.750
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.750
mgf021115m Mimulus guttatus mgf021115m I 0.750
mgf025363m Mimulus guttatus mgf025363m I 0.750
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.750
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.750
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.750
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.750
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.749
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.748
Bo4g151460 Brassica oleracea Bo4g151460 I 0.748
Bo7g118430 Brassica oleracea Bo7g118430 I 0.748
Bra017811 Brassica rapa Bra017811 I 0.748
Bra032173 Brassica rapa Bra032173 I 0.748
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.748
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.748
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.748
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.748
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.748
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.748
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.748
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.748
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.748
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.748
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.748
ERF010 Arabidopsis thaliana AT5G67190 D 0.747
Bo7g063980 Brassica oleracea Bo7g063980 I 0.747
Bo8g079660 Brassica oleracea Bo8g079660 I 0.747
Bra036061 Brassica rapa Bra036061 I 0.747
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.747
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.747
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.747
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.747
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.747
ERF011 Arabidopsis thaliana AT3G50260 D 0.746
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.746
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.746
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.746
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.745
mgf006561m Mimulus guttatus mgf006561m I 0.744
Bra014056 Brassica rapa Bra014056 I 0.742
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.742
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.742
Cla020961 Citrullus lanatus Cla020961 I 0.742
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.742
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.742
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.742
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.742
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.742
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.742
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.742
Bo9g020380 Brassica oleracea Bo9g020380 I 0.741
Bra037124 Brassica rapa Bra037124 I 0.741
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.740
TCM_033791 Theobroma cacao TCM_033791 I 0.740
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.740
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.740
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.740
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.740
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.739
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.739
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.739
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.739
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.739
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.739
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.739
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.739
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.739
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.739
OS04G0648900 Oryza sativa OS04G0648900 I 0.739
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.739
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.739
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.739
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.739
ERF008 Arabidopsis thaliana AT2G23340 D 0.738
Bo1g004940 Brassica oleracea Bo1g004940 I 0.738
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.738
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.737
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.736
Cla022937 Citrullus lanatus Cla022937 I 0.736
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.736
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.736
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.734
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.733
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.732
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.732
PK15612.1 Cannabis sativa PK15612.1 I 0.731
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.730
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.730
Bra012140 Brassica rapa Bra012140 I 0.726
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.726
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.721
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.721
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.718
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.717
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.716
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.716
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.714
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.710
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.699
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.697
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.689
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.689
Ca_01556 Cicer arietinum Ca_01556 I 0.689