CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022495m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf022495m
T007421_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.824
0.880
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.817
0.880
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.817
0.880
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.684
0.800
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.684
0.800
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022495m
AP2
153
204
RLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEDAAMAYDREAYKLRGD
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
438 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV08_06966
Exophiala spinifera
PV08_06966
I
0.000
M438DRAFT_344531
Aureobasidium pullulans
M438DRAFT_344531
I
0.000
PCH_Pc21g05540
Penicillium rubens
PCH_Pc21g05540
I
0.000
PEX1_087000
Penicillium expansum
PEX1_087000
I
0.000
PITC_054700
Penicillium italicum
PITC_054700
I
0.000
PMAA_033170
Talaromyces marneffei
PMAA_033170
I
0.000
PTRG_07169
Pyrenophora triticirepentis
PTRG_07169
I
0.000
PTT_16310
Pyrenophora teres
PTT_16310
I
0.000
PV06_08141
Exophiala oligosperma
PV06_08141
I
0.000
A1O9_01837
Exophiala aquamarina
A1O9_01837
I
0.000
SBOR_6101
Sclerotinia borealis
SBOR_6101
I
0.000
TSTA_064390
Talaromyces stipitatus
TSTA_064390
I
0.000
U727_0043114071
Penicillium solitum
U727_0043114071
I
0.000
W97_02535
Coniosporium apollinis
W97_02535
I
0.000
estExt_fgenesh1_pg.C_40169
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40169
I
0.000
Pc21g05540
Penicillium chrysogenum
Pc21g05540
I
0.000
PMAA_033170
Penicillium marneffei
PMAA_033170
I
0.000
NFIA_076190
Neosartorya fischeri
CADNFIAG00007846
I
0.000
A1O1_04263
Capronia coronata
A1O1_04263
I
0.000
AUEXF2481DRAFT_456199
Aureobasidium subglaciale
AUEXF2481DRAFT_456199
I
0.000
Bcin08g00170
Botrytis cinerea
Bcin08g00170
I
0.000
AFUA_5G11070
Aspergillus fumigatus
CADAFUAG00005917
I
0.000
CADAORAG00008740
Aspergillus oryzae
CADAORAG00008740
I
0.000
ATEG_07690
Aspergillus terreus
CADATEAG00003243
I
0.000
LEMA_P120870.1
Leptosphaeria maculans
LEMA_P120870.1
I
0.000
COCC4DRAFT_19355
Bipolaris maydis
COCC4DRAFT_19355
I
0.000
COCMIDRAFT_24418
Bipolaris oryzae
COCMIDRAFT_24418
I
0.000
COCCADRAFT_32122
Bipolaris zeicola
COCCADRAFT_32122
I
0.000
COCSADRAFT_306311
Bipolaris sorokiniana
COCSADRAFT_306311
I
0.000
EURHEDRAFT_417798
Aspergillus ruber
EURHEDRAFT_417798
I
0.000
COCVIDRAFT_12188
Bipolaris victoriae
COCVIDRAFT_12188
I
0.000
PCH_Pc13g06530
Penicillium rubens
PCH_Pc13g06530
N
0.000
GGTG_09020
Gaeumannomyces graminis
GGTG_09020
N
0.000
Pc13g06530
Penicillium chrysogenum
Pc13g06530
N
0.000
X797_011070
Metarhizium robertsii
X797_011070
N
0.000
PEX1_099950
Penicillium expansum
PEX1_099950
N
0.000
VHEMI09976
Torrubiella hemipterigena
VHEMI09976
N
0.000
U727_00430311331
Penicillium solitum
U727_00430311331
N
0.000
PITC_065540
Penicillium italicum
PITC_065540
N
0.000
TRIVIDRAFT_189391
Trichoderma virens
TRIVIDRAFT_189391
N
0.000
TRIVIDRAFT_149245
Trichoderma virens
TRIVIDRAFT_149245
N
0.000
PV11_05636
Exophiala sideris
PV11_05636
N
0.000
CCM_01638
Cordyceps militaris
CCM_01638
N
0.000