Aquca_122_00012 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_122_00012 T007537_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.733 0.880
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.733 0.880
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.720 0.820
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.720 0.820
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.720 0.820
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.698 0.840
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.698 0.840
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.698 0.840
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.698 0.840
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.682 0.740
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.682 0.740
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.682 0.740
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.682 0.740
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.682 0.740
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.682 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_122_00012.1 AP2 51 102

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dmd-9 Caenorhabditis elegans WBGene00022060 D
CBG03381 Caenorhabditis briggsae CBG03381 I
SMUV_0001084001 Syphacia muris SMUV_0001084001 I
scaffold54-EXSNAP2012.9 Pristionchus exspectatus scaffold54-EXSNAP2012.9 I
OESDEN_12332 Oesophagostomum dentatum OESDEN_12332 I
NECAME_08769 Necator americanus NECAME_08769 I
NBR_0000982201 Nippostrongylus brasiliensis NBR_0000982201 I
L898_g6334 Steinernema monticolum L898_g6334 I
L893_g6833 Steinernema glaseri L893_g6833 I
L892_g27590 Steinernema scapterisci L892_g27590 I
L889_g19153 Steinernema feltiae L889_g19153 I
L596_g25360 Steinernema carpocapsae L596_g25360 I
HCOI01956800 Haemonchus contortus HCOI01956800 I
HCOI00602900 Haemonchus contortus HCOI00602900 I
Hba_20459 Heterorhabditis bacteriophora Hba_20459 I
EVEC_0001300201 Enterobius vermicularis EVEC_0001300201 I
ASU_04764 Ascaris suum ASU_04764 I
BXY_0004500 Bursaphelenchus xylophilus BXY_0004500 I
ASIM_0001248901 Anisakis simplex ASIM_0001248901 I
ANCCEY_11797 Ancylostoma ceylanicum ANCCEY_11797 I
ACOC_0000878601 Angiostrongylus costaricensis ACOC_0000878601 I
PPA11400 Pristionchus pacificus PPA11400 I
CRE30014 Caenorhabditis remanei CRE30014 I
CJA18545 Caenorhabditis japonica CJA18545 I
CRE30013 Caenorhabditis remanei CRE30013 I
RSKR_0000795800 Rhabditophanes kr3021 RSKR_0000795800 N
SVE_0126800 Strongyloides venezuelensis SVE_0126800 N
scaffold126-EXSNAP2012.44 Pristionchus exspectatus scaffold126-EXSNAP2012.44 N
scaffold251-EXSNAP2012.33 Pristionchus exspectatus scaffold251-EXSNAP2012.33 N
CBG18895 Caenorhabditis briggsae CBG18895 N
WUBG_01942 Wuchereria bancrofti WUBG_01942 N
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 N
SPAL_0001661800 Strongyloides papillosus SPAL_0001661800 N
SSTP_0000497600 Strongyloides stercoralis SSTP_0000497600 N
PTRK_0001628400 Parastrongyloides trichosuri PTRK_0001628400 N
OFLC_0001397801 Onchocerca flexuosa OFLC_0001397801 N
CJA06642 Caenorhabditis japonica CJA06642 N
nDi.2.2.2.g06479 Dirofilaria immitis nDi.2.2.2.g06479 N
MhA1_Contig1400.frz3.gene1 Meloidogyne hapla MhA1_Contig1400.frz3.gene1 N
CRE30862 Caenorhabditis remanei CRE30862 N
dmd-7 Caenorhabditis elegans WBGene00019521 N
WBGene00240965 Onchocerca volvulus WBGene00240965 N
GPLIN_000574100 Globodera pallida GPLIN_000574100 N