Bostr.3359s0006 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.3359s0006 T007654_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.719 0.765
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.719 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3359s0006.1.p AP2 18 69

Links

Other AP2 family TFs
Other Boechera stricta TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g096140 Medicago truncatula MTR_3g096140 N 0.000
POPTR_0005s06040 Populus trichocarpa POPTR_0005s06040 N 0.000
Ca_04187 Cicer arietinum Ca_04187 N 0.000
Ca_09673 Cicer arietinum Ca_09673 N 0.000
chr4.CM0680.260.nc Lotus japonicus chr4.CM0680.260.nc N 0.000
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.000