Bostr.3359s0006 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.3359s0006 T007654_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.719 0.765
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.719 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3359s0006.1.p AP2 18 69

Links

Other AP2 family TFs
Other Boechera stricta TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g027240 Brassica oleracea Bo8g027240 I 0.805
ERF022 Arabidopsis thaliana AT1G33760 I 0.798
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.798
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.791
Bra028009 Brassica rapa Bra028009 I 0.777
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.777
Bo6g046850 Brassica oleracea Bo6g046850 I 0.771
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.764
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.763
Bra010210 Brassica rapa Bra010210 I 0.761
TCM_036269 Theobroma cacao TCM_036269 I 0.761
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.757
Pm004269 Prunus mume Pm004269 I 0.757
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.757
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.756
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.752
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.751
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.751
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.749
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.749
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.749
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.749
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.748
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.748
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.748
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.748
Bo5g086680 Brassica oleracea Bo5g086680 I 0.745
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.745
Pm004272 Prunus mume Pm004272 I 0.744
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.743
TCM_036270 Theobroma cacao TCM_036270 I 0.743
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.742
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.742
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.742
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.742
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.742
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.742
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.741
Cla012665 Citrullus lanatus Cla012665 I 0.741
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.739
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.738
MDP0000283350 Malus domestica MDP0000283350 I 0.738
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.737
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.736
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.735
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.735
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.733
MDP0000122739 Malus domestica MDP0000122739 I 0.731
MDP0000122740 Malus domestica MDP0000122740 I 0.731
MDP0000151428 Malus domestica MDP0000151428 I 0.731
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.729
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.727
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.727
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.727
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.727
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.726
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.723
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.722
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.722
28118.m000034 Ricinus communis 28118.m000034 I 0.721
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.721
ERF021 Arabidopsis thaliana AT1G71450 D 0.719
Bo2g072910 Brassica oleracea Bo2g072910 I 0.719
Bra007975 Brassica rapa Bra007975 I 0.719
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.719
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.719
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.719
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.718
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.718
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.717
Cla012661 Citrullus lanatus Cla012661 I 0.717
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.717
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.716
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.715
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.712
27805.m000021 Ricinus communis 27805.m000021 I 0.711
Bra016136 Brassica rapa Bra016136 I 0.710
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.710
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.710
Si026882m.g Setaria italica Si026882m.g I 0.708
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.706
Bo6g113020 Brassica oleracea Bo6g113020 I 0.703
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.703
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.701
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.699
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.693
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.692
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.692
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.692
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.692
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.692
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.691
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.689
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.689
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.688
OB11G16300 Oryza brachyantha OB11G16300 I 0.688
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.688
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.688
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.688
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.688
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.688
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.688
OS11G0242300 Oryza sativa OS11G0242300 I 0.688
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.688
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.688
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.688
F775_17299 Aegilops tauschii F775_17299 I 0.683
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.683
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.683
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.683
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.683
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.683
Ca_15064 Cicer arietinum Ca_15064 I 0.683
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.682
Bo6g094210 Brassica oleracea Bo6g094210 I 0.680
Bra003924 Brassica rapa Bra003924 I 0.680
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N 0.679