CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr11G12650_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_Achr11G12650_001
T002297_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr11P12650_001
AP2
7
58
VHYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESAEMAAVAHDVAELRLRGR
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G16250_001
Musa acuminata
GSMUA_Achr8G16250_001
I
0.810
GSMUA_Achr2G20760_001
Musa acuminata
GSMUA_Achr2G20760_001
I
0.798
LPERR11G07100
Leersia perrieri
LPERR11G07100
I
0.797
BGIOSGA034227
Oryza indica
BGIOSGA034227
I
0.796
BRADI4G21265
Brachypodium distachyon
BRADI4G21265
I
0.796
OGLUM11G07800
Oryza glumaepatula
OGLUM11G07800
I
0.796
OMERI11G06840
Oryza meridionalis
OMERI11G06840
I
0.796
ONIVA11G08160
Oryza nivara
ONIVA11G08160
I
0.796
OPUNC11G07750
Oryza punctata
OPUNC11G07750
I
0.796
ORGLA11G0070000
Oryza glaberrima
ORGLA11G0070000
I
0.796
ORUFI11G08240
Oryza rufipogon
ORUFI11G08240
I
0.796
OS11G0242300
Oryza sativa
OS11G0242300
I
0.796
Sb05g007135
Sorghum bicolor
Sb05g007135
I
0.796
Pavir.J22217
Panicum virgatum
Pavir.J22217
I
0.796
Pavir.J26137
Panicum virgatum
Pavir.J26137
I
0.796
AC198403.3_FG001
Zea mays
AC198403.3_FG001
I
0.793
F775_17299
Aegilops tauschii
F775_17299
I
0.791
MLOC_55144
Hordeum vulgare
MLOC_55144
I
0.791
Traes_4AL_D2D7703821
Triticum aestivum
Traes_4AL_D2D7703821
I
0.791
Traes_4BS_DD5E68382
Triticum aestivum
Traes_4BS_DD5E68382
I
0.791
Traes_4DS_97AC77E13
Triticum aestivum
Traes_4DS_97AC77E13
I
0.791
TRIUR3_32331
Triticum urartu
TRIUR3_32331
I
0.791
Si026882m.g
Setaria italica
Si026882m.g
I
0.783
OB11G16300
Oryza brachyantha
OB11G16300
I
0.775
TRIUR3_32168
Triticum urartu
TRIUR3_32168
I
0.764
Traes_2BL_9CD6E043A
Triticum aestivum
Traes_2BL_9CD6E043A
I
0.763
OMERI04G12360
Oryza meridionalis
OMERI04G12360
N
0.742
ONIVA04G11950
Oryza nivara
ONIVA04G11950
N
0.742
ORGLA04G0108200
Oryza glaberrima
ORGLA04G0108200
N
0.742
ORUFI04G15010
Oryza rufipogon
ORUFI04G15010
N
0.742
LPERR04G10650
Leersia perrieri
LPERR04G10650
N
0.741
TCM_036269
Theobroma cacao
TCM_036269
I
0.726
evm.TU.supercontig_21.70
Carica papaya
evm.TU.supercontig_21.70
I
0.725
OPUNC02G18630
Oryza punctata
OPUNC02G18630
N
0.724
VIT_18s0001g05850
Vitis vinifera
VIT_18s0001g05850
I
0.722
BGIOSGA006249
Oryza indica
BGIOSGA006249
N
0.721
LPERR02G16700
Leersia perrieri
LPERR02G16700
N
0.721
OB02G28310
Oryza brachyantha
OB02G28310
N
0.721
OGLUM02G20980
Oryza glumaepatula
OGLUM02G20980
N
0.721
OMERI02G20440
Oryza meridionalis
OMERI02G20440
N
0.721
ONIVA02G22690
Oryza nivara
ONIVA02G22690
N
0.721
ORUFI02G21740
Oryza rufipogon
ORUFI02G21740
N
0.721
OS02G0558700
Oryza sativa
OS02G0558700
N
0.721
Pm004272
Prunus mume
Pm004272
I
0.719
PRUPE_ppa018178mg
Prunus persica
PRUPE_ppa018178mg
I
0.718
Gorai.009G266600
Gossypium raimondii
Gorai.009G266600
I
0.716
gene27021-v1.0-hybrid
Fragaria vesca
gene27021-v1.0-hybrid
I
0.710
Gorai.005G116500
Gossypium raimondii
Gorai.005G116500
I
0.709
evm.TU.supercontig_21.69
Carica papaya
evm.TU.supercontig_21.69
I
0.708
PGSC0003DMG400018054
Solanum tuberosum
PGSC0003DMG400018054
I
0.707
MDP0000122739
Malus domestica
MDP0000122739
I
0.707
MDP0000122740
Malus domestica
MDP0000122740
I
0.707
MDP0000151428
Malus domestica
MDP0000151428
I
0.707
cassava43172.valid.m1
Manihot esculenta
cassava43172.valid.m1
I
0.706
cassava8552.m1
Manihot esculenta
cassava8552.m1
I
0.706
28118.m000034
Ricinus communis
28118.m000034
I
0.705
gene27017-v1.0-hybrid
Fragaria vesca
gene27017-v1.0-hybrid
I
0.704
chr2.CM0018.610.nd
Lotus japonicus
chr2.CM0018.610.nd
I
0.703
BRADI3G45997
Brachypodium distachyon
BRADI3G45997
N
0.702
GLYMA01G44130
Glycine max
GLYMA01G44130
I
0.702
PGSC0003DMG400017813
Solanum tuberosum
PGSC0003DMG400017813
I
0.701
POPTR_0013s10340
Populus trichocarpa
POPTR_0013s10340
I
0.701
POPTR_0019s10420
Populus trichocarpa
POPTR_0019s10420
I
0.701
PRUPE_ppa012354mg
Prunus persica
PRUPE_ppa012354mg
I
0.701
Pm004269
Prunus mume
Pm004269
I
0.701
SapurV1A.1130s0100
Salix purpurea
SapurV1A.1130s0100
I
0.701
SapurV1A.1331s0040
Salix purpurea
SapurV1A.1331s0040
I
0.701
Bo8g027240
Brassica oleracea
Bo8g027240
I
0.700
Cla012665
Citrullus lanatus
Cla012665
I
0.700
Cucsa.237150
Cucumis sativus
Cucsa.237150
I
0.700
Cla012661
Citrullus lanatus
Cla012661
I
0.699
Cucsa.237170
Cucumis sativus
Cucsa.237170
I
0.699
GLYMA01G44140
Glycine max
GLYMA01G44140
I
0.698
GLYMA11G01640
Glycine max
GLYMA11G01640
I
0.698
MTR_5g008590
Medicago truncatula
MTR_5g008590
I
0.698
Eucgr.F02974
Eucalyptus grandis
Eucgr.F02974
I
0.698
chr2.CM0018.470.nd
Lotus japonicus
chr2.CM0018.470.nd
I
0.698
SapurV1A.1130s0090
Salix purpurea
SapurV1A.1130s0090
I
0.697
SapurV1A.1331s0050
Salix purpurea
SapurV1A.1331s0050
I
0.697
Bra010210
Brassica rapa
Bra010210
I
0.695
POPTR_0013s10330
Populus trichocarpa
POPTR_0013s10330
I
0.695
MDP0000283350
Malus domestica
MDP0000283350
I
0.695
SapurV1A.0551s0030
Salix purpurea
SapurV1A.0551s0030
I
0.695
SapurV1A.0551s0040
Salix purpurea
SapurV1A.0551s0040
I
0.695
SapurV1A.3106s0010
Salix purpurea
SapurV1A.3106s0010
I
0.695
Thhalv10010002m.g
Eutrema salsugineum
Thhalv10010002m.g
I
0.695
ERF022
Arabidopsis thaliana
AT1G33760
I
0.693
Ciclev10023857m.g
Citrus clementina
Ciclev10023857m.g
I
0.693
orange1.1g035756m.g
Citrus sinensis
orange1.1g035756m.g
I
0.693
POPTR_0001s18180
Populus trichocarpa
POPTR_0001s18180
I
0.692
TCM_036270
Theobroma cacao
TCM_036270
I
0.692
Eucgr.F02975
Eucalyptus grandis
Eucgr.F02975
I
0.692
Bo5g086680
Brassica oleracea
Bo5g086680
I
0.691
POPTR_0019s10430
Populus trichocarpa
POPTR_0019s10430
I
0.691
27805.m000021
Ricinus communis
27805.m000021
I
0.690
Solyc11g042560.1
Solanum lycopersicum
Solyc11g042560.1
I
0.689
Ca_15064
Cicer arietinum
Ca_15064
I
0.689
POPTR_0003s05300
Populus trichocarpa
POPTR_0003s05300
I
0.688
Carubv10012215m.g
Capsella rubella
Carubv10012215m.g
I
0.688
OPUNC04G11630
Oryza punctata
OPUNC04G11630
N
0.686
Eucgr.F02976
Eucalyptus grandis
Eucgr.F02976
I
0.686
Gorai.009G266700
Gossypium raimondii
Gorai.009G266700
I
0.686
Lus10002953.g
Linum usitatissimum
Lus10002953.g
I
0.686
Bra028009
Brassica rapa
Bra028009
I
0.684
Carubv10011715m.g
Capsella rubella
Carubv10011715m.g
I
0.684
AMTR_s00099p00039760
Amborella trichopoda
AMTR_s00099p00039760
I
0.682
Solyc11g042580.1
Solanum lycopersicum
Solyc11g042580.1
I
0.682
Bostr.3359s0006
Boechera stricta
Bostr.3359s0006
I
0.682
Bo6g046850
Brassica oleracea
Bo6g046850
I
0.678
cassava45911.m1
Manihot esculenta
cassava45911.m1
I
0.678