Cagra.0228s0035 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.0228s0035 T007687_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.768 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0228s0035.1.p AP2 13 65

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF024 Arabidopsis thaliana AT2G36450 D 0.768
Bo3g030140 Brassica oleracea Bo3g030140 I 0.731
Bo4g034600 Brassica oleracea Bo4g034600 I 0.790
Bo4g186300 Brassica oleracea Bo4g186300 I 0.806
Bra017235 Brassica rapa Bra017235 I 0.826
Bra023070 Brassica rapa Bra023070 I 0.731
HRD Arabidopsis lyrata scaffold_402264.1 I 0.776
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.790
Carubv10024954m.g Capsella rubella Carubv10024954m.g I 0.826
Thhalv10017537m.g Eutrema salsugineum Thhalv10017537m.g I 0.808