Ciclev10022244m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10022244m.g T008025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.710 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.705 0.878
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.705 0.878
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.705 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10022244m AP2 39 90

Links

Other AP2 family TFs
Other Citrus clementina TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N
OS01G0862800 Oryza sativa OS01G0862800 N
OS12G0156100 Oryza sativa OS12G0156100 N
Sb03g040720 Sorghum bicolor Sb03g040720 N
Sb09g021780 Sorghum bicolor Sb09g021780 N
Si002586m.g Setaria italica Si002586m.g N
Si022966m.g Setaria italica Si022966m.g N
Traes_1AL_179FC28F2 Triticum aestivum Traes_1AL_179FC28F2 N
Traes_1AL_C76BCC7EC Triticum aestivum Traes_1AL_C76BCC7EC N
OPUNC12G03240 Oryza punctata OPUNC12G03240 N
TRIUR3_34272 Triticum urartu TRIUR3_34272 N
Ca_00818 Cicer arietinum Ca_00818 N
30055.m001588 Ricinus communis 30055.m001588 N
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N
Lus10004846.g Linum usitatissimum Lus10004846.g N
Lus10020643.g Linum usitatissimum Lus10020643.g N
Pavir.J02276 Panicum virgatum Pavir.J02276 N
Pavir.J04751 Panicum virgatum Pavir.J04751 N
Pavir.J36282 Panicum virgatum Pavir.J36282 N
LPERR11G02950 Leersia perrieri LPERR11G02950 N
BGIOSGA037019 Oryza indica BGIOSGA037019 N
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N
F775_19761 Aegilops tauschii F775_19761 N
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N
GRMZM2G465835 Zea mays GRMZM2G465835 N
GRMZM5G832473 Zea mays GRMZM5G832473 N
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N
LPERR01G32790 Leersia perrieri LPERR01G32790 N
LPERR05G14390 Leersia perrieri LPERR05G14390 N
BGIOSGA004848 Oryza indica BGIOSGA004848 N
MTR_7g105170 Medicago truncatula MTR_7g105170 N
OB05G26010 Oryza brachyantha OB05G26010 N
OBART01G38190 Oryza barthii OBART01G38190 N
OBART12G03440 Oryza barthii OBART12G03440 N
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N
OMERI01G35090 Oryza meridionalis OMERI01G35090 N
ONIVA01G42870 Oryza nivara ONIVA01G42870 N
ONIVA12G03060 Oryza nivara ONIVA12G03060 N
OPUNC01G36980 Oryza punctata OPUNC01G36980 N
OPUNC05G16010 Oryza punctata OPUNC05G16010 N