evm.TU.supercontig_19.121 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_19.121 T008280_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.788 0.939
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.730 0.857
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.722 0.837
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.703 0.898
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.703 0.898
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.694 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.694 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.694 0.816
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.692 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_19.121 AP2 80 131

Links

Other AP2 family TFs
Other Carica papaya TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g073380 Medicago truncatula MTR_1g073380 N 0.000
MTR_1g073590 Medicago truncatula MTR_1g073590 N 0.000
MTR_6g012370 Medicago truncatula MTR_6g012370 N 0.000
MTR_8g098655 Medicago truncatula MTR_8g098655 N 0.000
Ca_05766 Cicer arietinum Ca_05766 N 0.000
Cla014844 Citrullus lanatus Cla014844 N 0.000
cassava39038.m1 Manihot esculenta cassava39038.m1 N 0.000
Cucsa.106730 Cucumis sativus Cucsa.106730 N 0.000
gene31799-v1.0-hybrid Fragaria vesca gene31799-v1.0-hybrid N 0.000
orange1.1g006921m.g Citrus sinensis orange1.1g006921m.g N 0.000
SapurV1A.0098s0150 Salix purpurea SapurV1A.0098s0150 N 0.000