CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.106730
(
Cucumis sativus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Cucsa.106730
T015960_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.106730.1
ARID/BRIGHT
51
138
IRCYFEKVLWVFLKETCRRGFIRPVPALLGEGESLDLFELFMVVRDKGGYQVVSEKELWSSVVVELGLDLGLSASVKLIYFKYLSDLE
Links
Other
ARID/BRIGHT
family TFs
Other
Cucumis sativus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014844
Citrullus lanatus
Cla014844
N
0.763
Ciclev10019313m.g
Citrus clementina
Ciclev10019313m.g
N
0.545
orange1.1g006921m.g
Citrus sinensis
orange1.1g006921m.g
N
0.545
MTR_8g098655
Medicago truncatula
MTR_8g098655
N
0.514
MTR_1g073380
Medicago truncatula
MTR_1g073380
N
0.493
MTR_1g073590
Medicago truncatula
MTR_1g073590
N
0.493
MTR_6g012370
Medicago truncatula
MTR_6g012370
N
0.467
gene31799-v1.0-hybrid
Fragaria vesca
gene31799-v1.0-hybrid
N
0.450
Ca_05766
Cicer arietinum
Ca_05766
N
0.446