gene02470-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene02470-v1.0-hybrid T008354_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna02470.1-v1.0-hybrid AP2 71 128

Links

Other AP2 family TFs
Other Fragaria vesca TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.700
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.872
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.699
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.887
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.887
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.929
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.887
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.929
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.854
mgf019897m Mimulus guttatus mgf019897m N 0.914
mgf017600m Mimulus guttatus mgf017600m N 0.853
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.887
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.929
cassava40681.m1 Manihot esculenta cassava40681.m1 N 0.679
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.803
30170.m013669 Ricinus communis 30170.m013669 N 0.708
30006.m000282 Ricinus communis 30006.m000282 N 0.929
Cla022214 Citrullus lanatus Cla022214 N 0.715
Ca_07237 Cicer arietinum Ca_07237 N 0.887
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.929
BBM Vitis vinifera VIT_04s0023g00950 N 0.724
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.878
PDK_20s1313371g002 Phoenix dactylifera PDK_20s1313371g002 N 0.809
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.833
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.752
PK18855.1 Cannabis sativa PK18855.1 N 0.834
PK15670.1 Cannabis sativa PK15670.1 N 0.712
PK12273.1 Cannabis sativa PK12273.1 N 0.887
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.887
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.887
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.899
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.878
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.921
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.887
MDP0000803527 Malus domestica MDP0000803527 N 0.782
MDP0000314518 Malus domestica MDP0000314518 N 0.929
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.929
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.693
Lus10011730.g Linum usitatissimum Lus10011730.g N 0.693
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.929
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.887
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.724
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.879
OB06G31060 Oryza brachyantha OB06G31060 N 0.732
OB05G22940 Oryza brachyantha OB05G22940 N 0.921
OB03G42600 Oryza brachyantha OB03G42600 N 0.703
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.929
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.878
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.921
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.708
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.921
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.887
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.887
OBART05G15060 Oryza barthii OBART05G15060 N 0.921
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.887
F775_10869 Aegilops tauschii F775_10869 N 0.921
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.921
Bra004641 Brassica rapa Bra004641 N 0.887
Bo4g013420 Brassica oleracea Bo4g013420 N 0.887
Bo3g035770 Brassica oleracea Bo3g035770 N 0.929
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.732
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.921
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.887
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.878
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.761
TCM_024554 Theobroma cacao TCM_024554 N 0.887
Solyc02g030210.2 Solanum lycopersicum Solyc02g030210.2 N 0.753
Si021952m.g Setaria italica Si021952m.g N 0.878
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.921
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.929
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.929
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.929
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.921
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.896
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.921
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.921
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.732
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.921
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.921
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.732
OGLUM06G03000 Oryza glumaepatula OGLUM06G03000 N 0.769
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.921
OBART06G23380 Oryza barthii OBART06G23380 N 0.732