gene21003-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene21003-v1.0-hybrid T008415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.793 0.920
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.793 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna21003.1-v1.0-hybrid AP2 57 108

Links

Other AP2 family TFs
Other Fragaria vesca TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FRS5 Arabidopsis thaliana AT4G38180 N 0.000
Bo3g034290 Brassica oleracea Bo3g034290 N 0.000
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.000
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.000
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N 0.000
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.000
Cla015971 Citrullus lanatus Cla015971 N 0.000
Pm026968 Prunus mume Pm026968 N 0.000
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.000
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.000
PK08522.1 Cannabis sativa PK08522.1 N 0.000