POPTR_0011s14880 (Populus trichocarpa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 POPTR_0011s14880 T180101_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s14880.1 FAR1 100 193

Links

Other FAR1 family TFs
Other Populus trichocarpa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N 0.989
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.933
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N 0.922
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.889
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.889
Pm026968 Prunus mume Pm026968 N 0.889
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.889
MDP0000261311 Malus domestica MDP0000261311 N 0.878
mgf015959m Mimulus guttatus mgf015959m N 0.822
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.811
TCM_007609 Theobroma cacao TCM_007609 N 0.811
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.811
cassava9536.m1 Manihot esculenta cassava9536.m1 N 0.811
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 0.811
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.811
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.800
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.800
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.800
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.800
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.800
Cla015971 Citrullus lanatus Cla015971 N 0.800
Pm020704 Prunus mume Pm020704 N 0.800
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.800
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.800
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.800
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.800
MDP0000200105 Malus domestica MDP0000200105 N 0.800
MDP0000308670 Malus domestica MDP0000308670 N 0.800
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.800
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.800
PK08522.1 Cannabis sativa PK08522.1 N 0.800
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.789
FRS5 Arabidopsis thaliana AT4G38180 N 0.767
Bo3g034290 Brassica oleracea Bo3g034290 N 0.767
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.767
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.756
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 0.744
Carubv10007256m.g Capsella rubella Carubv10007256m.g N 0.744
mgf025666m Mimulus guttatus mgf025666m N 0.731