cassava23399.valid.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava23399.valid.m1 T181037_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava23399.valid.m1 FAR1 11 104

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N 0.933
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N 0.922
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.922
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.911
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.878
Pm026968 Prunus mume Pm026968 N 0.878
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.878
MDP0000261311 Malus domestica MDP0000261311 N 0.878
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.811
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.800
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.800
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.789
Pm020704 Prunus mume Pm020704 N 0.789
mgf015959m Mimulus guttatus mgf015959m N 0.789
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.789
MDP0000200105 Malus domestica MDP0000200105 N 0.789
MDP0000308670 Malus domestica MDP0000308670 N 0.789
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.789
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.789
TCM_007609 Theobroma cacao TCM_007609 N 0.778
Cla015971 Citrullus lanatus Cla015971 N 0.778
cassava9536.m1 Manihot esculenta cassava9536.m1 N 0.778
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.778
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 0.778
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.778
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.778
Bo3g034290 Brassica oleracea Bo3g034290 N 0.767
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.767
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.767
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.767
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.767
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.767
PK08522.1 Cannabis sativa PK08522.1 N 0.767
FRS5 Arabidopsis thaliana AT4G38180 N 0.756
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.756
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.756
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 0.744
Carubv10007256m.g Capsella rubella Carubv10007256m.g N 0.744