CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G407200
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.009G407200
T008663_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G407200.1
AP2
31
82
RLYRGVRRRTSGKWVSEIREPRKPNRIWLGTFPTPEMAAIAYDVAALALKGQ
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava21723.m1
Manihot esculenta
cassava21723.m1
N
0.716
orange1.1g039696m.g
Citrus sinensis
orange1.1g039696m.g
N
0.685
Gorai.002G159400
Gossypium raimondii
Gorai.002G159400
N
0.721
evm.TU.supercontig_5.71
Carica papaya
evm.TU.supercontig_5.71
N
0.725
Eucgr.K02071
Eucalyptus grandis
Eucgr.K02071
N
0.701
Ciclev10012757m.g
Citrus clementina
Ciclev10012757m.g
N
0.685
Cucsa.378470
Cucumis sativus
Cucsa.378470
N
0.696
Cucsa.083150
Cucumis sativus
Cucsa.083150
N
0.706
cassava32861.m1
Manihot esculenta
cassava32861.m1
N
0.724
GLYMA10G07740
Glycine max
GLYMA10G07740
N
0.715
29092.m000462
Ricinus communis
29092.m000462
N
0.677
Pm026227
Prunus mume
Pm026227
N
0.711
Cla018653
Citrullus lanatus
Cla018653
N
0.682
Cla017994
Citrullus lanatus
Cla017994
N
0.696
HRD
Vitis vinifera
VIT_08s0007g03810
N
0.681
TCM_022462
Theobroma cacao
TCM_022462
N
0.777
PRUPE_ppa020711mg
Prunus persica
PRUPE_ppa020711mg
N
0.715