cassava21723.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava21723.m1 T006850_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21723.m1 AP2 34 85

Links

Other AP2 family TFs
Other Manihot esculenta TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.767
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.766
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.757
Pm026227 Prunus mume Pm026227 N 0.748
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.747
Eucgr.K02071 Eucalyptus grandis Eucgr.K02071 N 0.741
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.736
TCM_022462 Theobroma cacao TCM_022462 N 0.729
29092.m000462 Ricinus communis 29092.m000462 N 0.720
HRD Vitis vinifera VIT_08s0007g03810 N 0.719
Gorai.009G407200 Gossypium raimondii Gorai.009G407200 N 0.716
Ciclev10012757m.g Citrus clementina Ciclev10012757m.g N 0.714
orange1.1g039696m.g Citrus sinensis orange1.1g039696m.g N 0.714
Cla017994 Citrullus lanatus Cla017994 N 0.710
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.710
Cla018653 Citrullus lanatus Cla018653 N 0.709
Lus10014376.g Linum usitatissimum Lus10014376.g N 0.701
Lus10023873.g Linum usitatissimum Lus10023873.g N 0.701
MDP0000195376 Malus domestica MDP0000195376 N 0.700
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.699
LjSGA_035548.1 Lotus japonicus LjSGA_035548.1 N 0.699
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.698
POPTR_0006s02180 Populus trichocarpa POPTR_0006s02180 N 0.697
GLYMA03G34970 Glycine max GLYMA03G34970 N 0.696
GLYMA15G02900 Glycine max GLYMA15G02900 N 0.696
GLYMA19G37670 Glycine max GLYMA19G37670 N 0.696
Gorai.002G241800 Gossypium raimondii Gorai.002G241800 N 0.690
SapurV1A.0154s0220 Salix purpurea SapurV1A.0154s0220 N 0.688
POPTR_0016s02010 Populus trichocarpa POPTR_0016s02010 N 0.685
Ca_00768 Cicer arietinum Ca_00768 N 0.677