CTRG_04585 (Candida tropicalis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 CTRG_04585 T011856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.723 0.577
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.723 0.577
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.723 0.577
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.723 0.577
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.706 0.526
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.697 0.500
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.697 0.551
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.673 0.372
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EER31802 APSES 1 81

Links

Other APSES family TFs
Other Candida tropicalis TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I
BGIOSGA027623 Oryza indica BGIOSGA027623 I
Bo5g002810 Brassica oleracea Bo5g002810 I
Bo5g002850 Brassica oleracea Bo5g002850 I
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I
F775_13961 Aegilops tauschii F775_13961 I
F775_30082 Aegilops tauschii F775_30082 I
F775_30297 Aegilops tauschii F775_30297 I
GLYMA14G36840 Glycine max GLYMA14G36840 I
GRMZM2G003715 Zea mays GRMZM2G003715 I
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I
LPERR08G03510 Leersia perrieri LPERR08G03510 I
MLOC_37843 Hordeum vulgare MLOC_37843 I
MLOC_50406 Hordeum vulgare MLOC_50406 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_3g093050 Medicago truncatula MTR_3g093050 I
MTR_5g069030 Medicago truncatula MTR_5g069030 I
MTR_8g023840 Medicago truncatula MTR_8g023840 I
MTR_8g023860 Medicago truncatula MTR_8g023860 I
OB08G13730 Oryza brachyantha OB08G13730 I
OBART08G03460 Oryza barthii OBART08G03460 I
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OLONG_000105 Oryza longistaminata OLONG_000105 I
OMERI08G03500 Oryza meridionalis OMERI08G03500 I
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
OPUNC08G03310 Oryza punctata OPUNC08G03310 I
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
OS08G0157900 Oryza sativa OS08G0157900 I
OS08G0511200 Oryza sativa OS08G0511200 I
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I
Sb07g003900 Sorghum bicolor Sb07g003900 I
Si013369m.g Setaria italica Si013369m.g I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
TCM_015535 Theobroma cacao TCM_015535 I
TCM_029796 Theobroma cacao TCM_029796 I
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
TRIUR3_32613 Triticum urartu TRIUR3_32613 I
Ca_04069 Cicer arietinum Ca_04069 I
Ca_20988 Cicer arietinum Ca_20988 I
Ca_27204 Cicer arietinum Ca_27204 I
Cla011742 Citrullus lanatus Cla011742 I
Pm019659 Prunus mume Pm019659 I
mgf015836m Mimulus guttatus mgf015836m I
mgf022344m Mimulus guttatus mgf022344m I
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I
BGIOSGA022116 Oryza indica BGIOSGA022116 N
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N
GRMZM2G163914 Zea mays GRMZM2G163914 N
GRMZM2G459156 Zea mays GRMZM2G459156 N
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N
LPERR06G00060 Leersia perrieri LPERR06G00060 N
MLOC_25708 Hordeum vulgare MLOC_25708 N
MLOC_65714 Hordeum vulgare MLOC_65714 N
MLOC_75297 Hordeum vulgare MLOC_75297 N
MTR_8g023880 Medicago truncatula MTR_8g023880 N
OBART06G00060 Oryza barthii OBART06G00060 N
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N
OLONG_004904 Oryza longistaminata OLONG_004904 N
OMERI06G00050 Oryza meridionalis OMERI06G00050 N
ONIVA06G00080 Oryza nivara ONIVA06G00080 N
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N
OS06G0101800 Oryza sativa OS06G0101800 N
Sb10g000101 Sorghum bicolor Sb10g000101 N
Si006105m.g Setaria italica Si006105m.g N
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N
Traes_7AS_A6C843545 Triticum aestivum Traes_7AS_A6C843545 N
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N
SapurV1A.0003s0310 Salix purpurea SapurV1A.0003s0310 N