e_gw1.7.880.1 (Cryphonectria parasitica)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 e_gw1.7.880.1 T013973_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.5.76.1
M01652_2.00 		Nectria haematococca
NNVTGCABNN
NNVTGCABNN		 PBM
Weirauch et al.(2014)
pTH9267 		0.868 0.964
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.839 0.928
stuA
M01649_2.00 		Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN		 PBM
Weirauch et al.(2014)
pTH9236 		0.724 0.855
stuA
M09761_2.00 		Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH		 Transfac
Matys et al.(2006)
F$STUAP_01 		0.724 0.855
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.7.880.1 APSES 95 182

Links

Other APSES family TFs
Other Cryphonectria parasitica TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N
Carubv10012426m.g Capsella rubella Carubv10012426m.g N
Carubv10019876m.g Capsella rubella Carubv10019876m.g N
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N
Eucgr.J00905 Eucalyptus grandis Eucgr.J00905 N
Eucgr.J02823 Eucalyptus grandis Eucgr.J02823 N
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N
mgf013194m Mimulus guttatus mgf013194m N
MDP0000261067 Malus domestica MDP0000261067 N
MDP0000279204 Malus domestica MDP0000279204 N
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N
PK02666.1 Cannabis sativa PK02666.1 N
PDK_20s1327961g002 Phoenix dactylifera PDK_20s1327961g002 N
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N
TCM_029115 Theobroma cacao TCM_029115 N
TRFL6 Arabidopsis thaliana AT1G72650 N
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N
GLYMA07G04160 Glycine max GLYMA07G04160 N
GLYMA16G00870 Glycine max GLYMA16G00870 N
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N
MTR_8g020330 Medicago truncatula MTR_8g020330 N
PGSC0003DMG400002481 Solanum tuberosum PGSC0003DMG400002481 N
POPTR_0001s17020 Populus trichocarpa POPTR_0001s17020 N
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N
AMTR_s00024p00216510 Amborella trichopoda AMTR_s00024p00216510 N
VIT_06s0004g02520 Vitis vinifera VIT_06s0004g02520 N
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N
Ca_10028 Cicer arietinum Ca_10028 N
Cla015802 Citrullus lanatus Cla015802 N
Pm013286 Prunus mume Pm013286 N
29706.m001295 Ricinus communis 29706.m001295 N
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N
Cucsa.360310 Cucumis sativus Cucsa.360310 N