GSMUA_AchrUn_randomG12940_001 (Musa acuminata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 GSMUA_AchrUn_randomG12940_001 T015030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.785 0.871
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.591 0.729
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_AchrUn_randomP12940_001 ARID/BRIGHT 217 302

Links

Other ARID/BRIGHT family TFs
Other Musa acuminata TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP68 Arabidopsis thaliana AT1G32150 D
BZIP16 Arabidopsis thaliana AT2G35530 D
GBF1 Arabidopsis thaliana AT4G36730 D
EMBP1_WHEAT Triticum aestivum EMBP1_WHEAT D
EmBP-1 Triticum aestivum Traes_5AL_9BC38814C D
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I
BGIOSGA013793 Oryza indica BGIOSGA013793 I
BGIOSGA025382 Oryza indica BGIOSGA025382 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bra005335 Brassica rapa Bra005335 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
BRADI1G04510 Brachypodium distachyon BRADI1G04510 I
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I
F775_07803 Aegilops tauschii F775_07803 I
F775_14728 Aegilops tauschii F775_14728 I
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
GLYMA01G01740 Glycine max GLYMA01G01740 I
GLYMA02G06550 Glycine max GLYMA02G06550 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA16G25600 Glycine max GLYMA16G25600 I
GRMZM2G095078 Zea mays GRMZM2G095078 I
GRMZM2G171370 Zea mays GRMZM2G171370 I
GRMZM5G884349 Zea mays GRMZM5G884349 I
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I
GSMUA_Achr6G00170_001 Musa acuminata GSMUA_Achr6G00170_001 I
LPERR03G32540 Leersia perrieri LPERR03G32540 I
LPERR07G06120 Leersia perrieri LPERR07G06120 I
MLOC_6711 Hordeum vulgare MLOC_6711 I
MLOC_79342 Hordeum vulgare MLOC_79342 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
MTR_8g077950 Medicago truncatula MTR_8g077950 I
OB07G15280 Oryza brachyantha OB07G15280 I
OBART07G07070 Oryza barthii OBART07G07070 I
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I
OLONG_021599 Oryza longistaminata OLONG_021599 I
OMERI06G11100 Oryza meridionalis OMERI06G11100 I
OMERI07G05820 Oryza meridionalis OMERI07G05820 I
ONIVA07G05320 Oryza nivara ONIVA07G05320 I
OPUNC07G06790 Oryza punctata OPUNC07G06790 I
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I
OS07G0209800 Oryza sativa OS07G0209800 I
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
Sb02g006350 Sorghum bicolor Sb02g006350 I
GBF1 Arabidopsis lyrata scaffold_700433.1 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
SELMODRAFT_38592 Selaginella moellendorffii SELMODRAFT_38592 I
SELMODRAFT_38594 Selaginella moellendorffii SELMODRAFT_38594 I
Si030123m.g Setaria italica Si030123m.g I
Si039367m.g Setaria italica Si039367m.g I
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I
TCM_000436 Theobroma cacao TCM_000436 I
TCM_005210 Theobroma cacao TCM_005210 I
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I
Traes_5BL_F3018E8CA Triticum aestivum Traes_5BL_F3018E8CA I
Traes_5DL_75AEE92BB Triticum aestivum Traes_5DL_75AEE92BB I
Traes_7DL_67C4287B2 Triticum aestivum Traes_7DL_67C4287B2 I
TRIUR3_18341 Triticum urartu TRIUR3_18341 I
TRIUR3_31142 Triticum urartu TRIUR3_31142 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I
Ca_15839 Cicer arietinum Ca_15839 I
Cla014415 Citrullus lanatus Cla014415 I
Cla016502 Citrullus lanatus Cla016502 I
Pm023132 Prunus mume Pm023132 I
Pm026586 Prunus mume Pm026586 I
29646.m001068 Ricinus communis 29646.m001068 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
Cucsa.104970 Cucumis sativus Cucsa.104970 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I
mgf000639m Mimulus guttatus mgf000639m I
mgf003302m Mimulus guttatus mgf003302m I
mgf005151m Mimulus guttatus mgf005151m I
mgf008605m Mimulus guttatus mgf008605m I
mgf013423m Mimulus guttatus mgf013423m I
mgf014804m Mimulus guttatus mgf014804m I
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
MDP0000185553 Malus domestica MDP0000185553 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000286846 Malus domestica MDP0000286846 I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I
Pavir.J02462 Panicum virgatum Pavir.J02462 I
Pavir.J09275 Panicum virgatum Pavir.J09275 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I