Bra018869 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra018869 T018852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018869.1-P B3 171 277

Links

Other B3 family TFs
Other Brassica rapa TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcl6 Mus musculus ENSMUSG00000022508 D 0.000
BCL6 Homo sapiens ENSG00000113916 D 0.000
Aan_R013387 Calypte anna Aan_R013387 I 0.000
BCL6 Otolemur garnettii ENSOGAG00000007638 I 0.000
BCL6 Ochotona princeps ENSOPRG00000005797 I 0.000
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.000
ENSPPYG00000014395 Pongo abelii ENSPPYG00000014395 I 0.000
ENSPSIG00000014529 Pelodiscus sinensis ENSPSIG00000014529 I 0.000
BCL6 Pan troglodytes ENSPTRG00000015728 I 0.000
Bcl6 Rattus norvegicus ENSRNOG00000001843 I 0.000
ENSSHAG00000013935 Sarcophilus harrisii ENSSHAG00000013935 I 0.000
BCL6 Sus scrofa ENSSSCG00000011810 I 0.000
BCL6 Taeniopygia guttata ENSTGUG00000009413 I 0.000
BCL6 Tursiops truncatus ENSTTRG00000017230 I 0.000
BCL6 Ornithorhynchus anatinus ENSOANG00000000872 I 0.000
Afo_R010236 Aptenodytes forsteri Afo_R010236 I 0.000
Alligator_sinensis_CCG010229.1 Alligator sinensis Alligator_sinensis_CCG010229.1 I 0.000
Brh_R006050 Buceros rhinoceros Brh_R006050 I 0.000
Cmyd_10010560 Chelonia mydas Cmyd_10010560 I 0.000
ENSBTAP00000001978-D1 Bos grunniens ENSBTAP00000001978-D1 I 0.000
ENSP00000384371 Macaca fascicularis ENSP00000384371 I 0.000
Gfo_R004424 Geospiza fortis Gfo_R004424 I 0.000
Myotis_brandtii_BCL6_10016106 Myotis brandtii Myotis_brandtii_BCL6_10016106 I 0.000
Pvit_01837 Pogona vitticeps Pvit_01837 I 0.000
Tal_R005794 Tyto alba Tal_R005794 I 0.000
bcl6.S Xenopus laevis XB-GENE-17336238 I 0.000
bcl6 Xenopus tropicalis XB-GENE-984479 I 0.000
bcl6.L Xenopus laevis XB-GENE-984483 I 0.000
ENSFALG00000007407 Ficedula albicollis ENSFALG00000007407 I 0.000
ENSAMEG00000000812 Ailuropoda melanoleuca ENSAMEG00000000812 I 0.000
ENSAPLG00000015868 Anas platyrhynchos ENSAPLG00000015868 I 0.000
BCL6 Bos taurus ENSBTAG00000001511 I 0.000
BCL6 Canis familiaris ENSCAFG00000013904 I 0.000
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.000
BCL6 Cavia porcellus ENSCPOG00000004090 I 0.000
ENSCSAG00000009138 Chlorocebus sabaeus ENSCSAG00000009138 I 0.000
BCL6 Dasypus novemcinctus ENSDNOG00000004306 I 0.000
Bcl6 Dipodomys ordii ENSDORG00000005608 I 0.000
BCL6 Equus caballus ENSECAG00000004556 I 0.000
BCL6 Erinaceus europaeus ENSEEUG00000000344 I 0.000
BCL6 Echinops telfairi ENSETEG00000014830 I 0.000
BCL6 Oryctolagus cuniculus ENSOCUG00000005429 I 0.000
BCL6 Felis catus ENSFCAG00000006810 I 0.000
BCL6 Gallus gallus ENSGALG00000007357 I 0.000
BCL6 Gorilla gorilla ENSGGOG00000026549 I 0.000
BCL6 Loxodonta africana ENSLAFG00000012300 I 0.000
ENSMEUG00000004411 Macropus eugenii ENSMEUG00000004411 I 0.000
BCL6 Meleagris gallopavo ENSMGAG00000007602 I 0.000
BCL6 Myotis lucifugus ENSMLUG00000012905 I 0.000
BCL6 Macaca mulatta ENSMMUG00000009198 I 0.000
ENSMPUG00000003415 Mustela putorius furo ENSMPUG00000003415 I 0.000
ENSNLEG00000006705 Nomascus leucogenys ENSNLEG00000006705 I 0.000
BCL6 Anolis carolinensis ENSACAG00000006666 I 0.000