CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G405699
(
Zea mays
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GRMZM2G405699
T019440_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDEF1
M09774_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$IDEF1_Q2
0.835
0.835
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G405699_P01
B3
234
316
LRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQMDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDT
GRMZM2G405699_P02
B3
231
313
LRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQMDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDT
GRMZM2G405699_P03
B3
98
180
LRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQMDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDT
Links
Other
B3
family TFs
Other
Zea mays
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_28679
Aegilops tauschii
F775_28679
I
0.848
GRMZM2G125596
Zea mays
GRMZM2G125596
I
0.821
ONIVA08G00050
Oryza nivara
ONIVA08G00050
I
0.725
Sb07g000220
Sorghum bicolor
Sb07g000220
I
0.821
Si015586m.g
Setaria italica
Si015586m.g
I
0.937
Traes_7AL_C0DB55E98
Triticum aestivum
Traes_7AL_C0DB55E98
I
0.823
Traes_7BL_6183FA9D4
Triticum aestivum
Traes_7BL_6183FA9D4
I
0.848
TRIUR3_27457
Triticum urartu
TRIUR3_27457
I
0.848
Pavir.Fa02368
Panicum virgatum
Pavir.Fa02368
I
0.763
Pavir.Fb00027
Panicum virgatum
Pavir.Fb00027
I
0.771
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N
0.747