ONIVA08G00050 (Oryza nivara)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ONIVA08G00050 T020341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDEF1
M09774_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$IDEF1_Q2 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA08G00050.1 B3 206 305
ONIVA08G00050.2 B3 251 350
ONIVA08G00050.3 B3 251 346

Links

Other B3 family TFs
Other Oryza nivara TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM08G00080 Oryza glumaepatula OGLUM08G00080 I 1.000
ORUFI08G00070 Oryza rufipogon ORUFI08G00070 I 1.000
IDEF1 Oryza sativa OS08G0101000 D 1.000
OBART08G00060 Oryza barthii OBART08G00060 I 1.000
OLONG_014444 Oryza longistaminata OLONG_014444 I 1.000
BGIOSGA027821 Oryza indica BGIOSGA027821 I 0.989
OB08G10110 Oryza brachyantha OB08G10110 I 0.968
LPERR08G00120 Leersia perrieri LPERR08G00120 I 0.905
Si015586m.g Setaria italica Si015586m.g I 0.884
BRADI3G12910 Brachypodium distachyon BRADI3G12910 I 0.853
Sb07g000220 Sorghum bicolor Sb07g000220 I 0.842
GRMZM2G125596 Zea mays GRMZM2G125596 I 0.842
Pavir.Fb00027 Panicum virgatum Pavir.Fb00027 I 0.812
Pavir.Fa02368 Panicum virgatum Pavir.Fa02368 I 0.811
MLOC_37086 Hordeum vulgare MLOC_37086 I 0.800
TRIUR3_27457 Triticum urartu TRIUR3_27457 I 0.789
Traes_7BL_6183FA9D4 Triticum aestivum Traes_7BL_6183FA9D4 I 0.789
F775_28679 Aegilops tauschii F775_28679 I 0.789
Traes_7AL_C0DB55E98 Triticum aestivum Traes_7AL_C0DB55E98 I 0.779
GRMZM2G405699 Zea mays GRMZM2G405699 I 0.725