CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA027821
(
Oryza indica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
BGIOSGA027821
T018559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDEF1
M09774_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$IDEF1_Q2
0.865
0.865
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA027821-PA
B3
250
350
LRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFQYPVST
Links
Other
B3
family TFs
Other
Oryza indica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA08G00050
Oryza nivara
ONIVA08G00050
I
0.989
OBART08G00060
Oryza barthii
OBART08G00060
I
0.874
OGLUM08G00080
Oryza glumaepatula
OGLUM08G00080
I
0.874
OLONG_014444
Oryza longistaminata
OLONG_014444
I
0.874
ORUFI08G00070
Oryza rufipogon
ORUFI08G00070
I
0.874
IDEF1
Oryza sativa
OS08G0101000
D
0.874
LPERR08G00120
Leersia perrieri
LPERR08G00120
I
0.872
OB08G10110
Oryza brachyantha
OB08G10110
I
0.854
Pavir.Fb00027
Panicum virgatum
Pavir.Fb00027
I
0.812
MLOC_37086
Hordeum vulgare
MLOC_37086
I
0.771
F775_28679
Aegilops tauschii
F775_28679
I
0.760
Si015586m.g
Setaria italica
Si015586m.g
I
0.760
Traes_7BL_6183FA9D4
Triticum aestivum
Traes_7BL_6183FA9D4
I
0.760
TRIUR3_27457
Triticum urartu
TRIUR3_27457
I
0.760
Pavir.Fa02368
Panicum virgatum
Pavir.Fa02368
I
0.753
Traes_7AL_C0DB55E98
Triticum aestivum
Traes_7AL_C0DB55E98
I
0.750
BRADI3G12910
Brachypodium distachyon
BRADI3G12910
I
0.737
GRMZM2G125596
Zea mays
GRMZM2G125596
I
0.719
Sb07g000220
Sorghum bicolor
Sb07g000220
I
0.719