CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0014s03610
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0014s03610
T020903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0014s03610.1
B3
42
132
ITGLTQSKLFTWQRIPVSFIKHMEGKTPGLVSLLGPSGDVWTADLTQENDDVLFSNGWSEFVRDHFLECGDLLVFRYHGELCFSVQVFDQS
POPTR_0014s03610.1
B3
289
385
FVRIMKRFNVSGSYTLNIPYQFSMAHLPNCRTEIILRTIKGACWSVNSVPATRVHTSHTLCGGWMAFVRSNDINVGDVCIFELVRKYELRVFILRVG
POPTR_0014s03610.1
B3
514
612
FVRIMRKFNVSGSYTLKIPHQFSAAYLPNCKTEVILCNLQGRCWTVNSLPDSKGRAVHTFCGGWMAFVRDNNIKIGDICMFELVGKCQMRCLAMILPHE
POPTR_0014s03610.2
B3
19
110
FFVIFSSNLSSERLRIPVSFIKHMEGKTPGLVSLLGPSGDVWTADLTQENDDVLFSNGWSEFVRDHFLECGDLLVFRYHGELCFSVQVFDQS
POPTR_0014s03610.2
B3
267
363
FVRIMKRFNVSGSYTLNIPYQFSMAHLPNCRTEIILRTIKGACWSVNSVPATRVHTSHTLCGGWMAFVRSNDINVGDVCIFELVRKYELRVFILRVG
POPTR_0014s03610.2
B3
492
590
FVRIMRKFNVSGSYTLKIPHQFSAAYLPNCKTEVILCNLQGRCWTVNSLPDSKGRAVHTFCGGWMAFVRDNNIKIGDICMFELVGKCQMRCLAMILPHE
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_19291
Ancylostoma caninum
ANCCAN_19291
N
ANCCEY_11111
Ancylostoma ceylanicum
ANCCEY_11111
N
ANCDUO_01346
Ancylostoma duodenale
ANCDUO_01346
N
DICVIV_01001
Dictyocaulus viviparus
DICVIV_01001
N
HCOI00590100
Haemonchus contortus
HCOI00590100
N
HCOI01764700
Haemonchus contortus
HCOI01764700
N
HPBE_0001808001
Heligmosomoides bakeri
HPBE_0001808001
N
HPLM_0001646201
Haemonchus placei
HPLM_0001646201
N
NECAME_11932
Necator americanus
NECAME_11932
N
SVUK_0001318601
Strongylus vulgaris
SVUK_0001318601
N
TELCIR_12721
Teladorsagia circumcincta
TELCIR_12721
N