CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001318601
(
Strongylus vulgaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SVUK_0001318601
T337086_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001318601-mRNA-1
Sox
3
66
MNPLAIFVKEHFGKNSAKNIEEGQKTMKEAVAAWKTLDSTERKKYEELSKKYREKKMREFDALS
SVUK_0001318601-mRNA-1
Sox
103
155
PERPPSAYNLFVQERFTILKNKGEIITPVAKTMRRVSAEWSAMNETAKQARFT
Links
Other
Sox
family TFs
Other
Strongylus vulgaris
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_11932
Necator americanus
NECAME_11932
N
0.528
OESDEN_17225
Oesophagostomum dentatum
OESDEN_17225
N
0.500
ANCCAN_19291
Ancylostoma caninum
ANCCAN_19291
N
0.487
ANCCEY_11111
Ancylostoma ceylanicum
ANCCEY_11111
N
0.487
ANCDUO_01346
Ancylostoma duodenale
ANCDUO_01346
N
0.487
NBR_0000222301
Nippostrongylus brasiliensis
NBR_0000222301
N
0.445
HPBE_0001808001
Heligmosomoides bakeri
HPBE_0001808001
N
0.425