29908.m005953 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 29908.m005953 T022184_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29908.m005953 B3 130 232

Links

Other B3 family TFs
Other Ricinus communis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_463994 Amanita muscaria M378DRAFT_463994 I 0.000
M378DRAFT_9324 Amanita muscaria M378DRAFT_9324 N 0.000
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh1_pg.C_scaffold_4000174 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000174 N 0.000
SERLA73DRAFT_181394 Serpula lacrymans SERLA73DRAFT_181394 N 0.000
SCHCODRAFT_76401 Schizophyllum commune SCHCODRAFT_76401 N 0.000
PLICRDRAFT_45259 Plicaturopsis crispa PLICRDRAFT_45259 N 0.000
PLEOSDRAFT_174562 Pleurotus ostreatus PLEOSDRAFT_174562 N 0.000
PISMIDRAFT_112540 Pisolithus microcarpus PISMIDRAFT_112540 N 0.000
PILCRDRAFT_819471 Piloderma croceum PILCRDRAFT_819471 N 0.000
PILCRDRAFT_401124 Piloderma croceum PILCRDRAFT_401124 N 0.000
PAXRUDRAFT_822144 Paxillus rubicundulus PAXRUDRAFT_822144 N 0.000
PAXINDRAFT_170453 Paxillus involutus PAXINDRAFT_170453 N 0.000
Moror_12870 Moniliophthora roreri Moror_12870 N 0.000
M413DRAFT_29155 Hebeloma cylindrosporum M413DRAFT_29155 N 0.000
AGABI2DRAFT_191136 Agaricus bisporus AGABI2DRAFT_191136 N 0.000
LACBIDRAFT_296989 Laccaria bicolor LACBIDRAFT_296989 N 0.000
K443DRAFT_670658 Laccaria amethystina K443DRAFT_670658 N 0.000
JAAARDRAFT_47740 Jaapia argillacea JAAARDRAFT_47740 N 0.000
JAAARDRAFT_194246 Jaapia argillacea JAAARDRAFT_194246 N 0.000
HETIRDRAFT_439748 Heterobasidion irregulare HETIRDRAFT_439748 N 0.000
GLOTRDRAFT_78300 Gloeophyllum trabeum GLOTRDRAFT_78300 N 0.000
GALMADRAFT_244440 Galerina marginata GALMADRAFT_244440 N 0.000
FOMPIDRAFT_132799 Fomitopsis pinicola FOMPIDRAFT_132799 N 0.000
CY34DRAFT_12675 Suillus luteus CY34DRAFT_12675 N 0.000
CC1G_07059 Coprinopsis cinerea CC1G_07059 N 0.000
BN946_scf184939.g72 Trametes cinnabarina BN946_scf184939.g72 N 0.000