CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1226s0063
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.1226s0063
T022743_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1226s0063.1.p
B3
115
217
FSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRAN
Cagra.1226s0063.1.p
B3
537
592
AALNGYNELIEDLEKLFDIKGELQSRNQWEVVFTDDEGDMMLVGDDPWPEFCNMVK
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G24860
Arabidopsis thaliana
AT3G24860
N
0.000
Bo7g031620
Brassica oleracea
Bo7g031620
N
0.000
Bra015090
Brassica rapa
Bra015090
N
0.000
fgenesh2_kg.3__2704__AT3G24860.1
Arabidopsis lyrata
fgenesh2_kg.3__2704__AT3G24860.1
N
0.000
Bostr.19424s0134
Boechera stricta
Bostr.19424s0134
N
0.000
Cagra.5961s0001
Capsella grandiflora
Cagra.5961s0001
N
0.000
Thhalv10002843m.g
Eutrema salsugineum
Thhalv10002843m.g
N
0.000