CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.3__2704__AT3G24860.1
(
Arabidopsis lyrata
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
fgenesh2_kg.3__2704__AT3G24860.1
T249062_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.3__2704__AT3G24860.1
MADF
58
148
ARKTQPVLWTHDETLLLIESYKEKWYAIGRGPLKSTHWEEIAVAVSSRSGVERSSTQCRHKIEKMRKRFRSERQNMGPISIWPFYNQMEEL
Links
Other
MADF
family TFs
Other
Arabidopsis lyrata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G24860
Arabidopsis thaliana
AT3G24860
N
0.946
Bostr.19424s0134
Boechera stricta
Bostr.19424s0134
N
0.934
Cagra.5961s0001
Capsella grandiflora
Cagra.5961s0001
N
0.907
Carubv10014242m.g
Capsella rubella
Carubv10014242m.g
N
0.907
Thhalv10002843m.g
Eutrema salsugineum
Thhalv10002843m.g
N
0.900
Bo7g031620
Brassica oleracea
Bo7g031620
N
0.893
Bra015090
Brassica rapa
Bra015090
N
0.893