CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.5742s0010
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.5742s0010
T022806_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.5742s0010.1.p
B3
125
216
FVKPMLQSHVTGGFWLGLPLRFCKTHLPKRDEMMTLVDEEDEEFLAKYLFEKNGLSGGWRGFSIDHQLLDGDAVVFHLITPTTFKVYIIRVN
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.750
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.772
Bra035129
Brassica rapa
Bra035129
N
0.772
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.750
Cla016258
Citrullus lanatus
Cla016258
N
0.707
mgf008645m
Mimulus guttatus
mgf008645m
N
0.739
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.870
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.902
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.739
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.739
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.728