CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_8.187
(
Carica papaya
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
evm.TU.supercontig_8.187
T023157_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_8.187
B3
606
707
LQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKV
Links
Other
B3
family TFs
Other
Carica papaya
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Nfkb1
Mus musculus
ENSMUSG00000028163
D
0.000
NFKB1
Homo sapiens
ENSG00000109320
D
0.000
NFKB1
Tursiops truncatus
ENSTTRG00000010852
I
0.000
NFKB1
Otolemur garnettii
ENSOGAG00000012840
I
0.000
NFKB1
Ochotona princeps
ENSOPRG00000005212
I
0.000
ENSPANG00000023882
Papio anubis
ENSPANG00000023882
I
0.000
NFKB1
Procavia capensis
ENSPCAG00000008172
I
0.000
ENSPPYG00000014965
Pongo abelii
ENSPPYG00000014965
I
0.000
ENSPSIG00000008515
Pelodiscus sinensis
ENSPSIG00000008515
I
0.000
NFKB1
Pan troglodytes
ENSPTRG00000016320
I
0.000
NFKB1
Pteropus vampyrus
ENSPVAG00000002722
I
0.000
Nfkb1
Rattus norvegicus
ENSRNOG00000023258
I
0.000
ENSSHAG00000007374
Sarcophilus harrisii
ENSSHAG00000007374
I
0.000
NFKB1
Sus scrofa
ENSSSCG00000030957
I
0.000
ENSSTOG00000011445
Ictidomys tridecemlineatus
ENSSTOG00000011445
I
0.000
NFKB1
Tupaia belangeri
ENSTBEG00000003520
I
0.000
NFKB1
Taeniopygia guttata
ENSTGUG00000003595
I
0.000
ENSOARG00000012718
Ovis aries
ENSOARG00000012718
I
0.000
NFKB1
Vicugna pacos
ENSVPAG00000000280
I
0.000
Afo_R015662
Aptenodytes forsteri
Afo_R015662
I
0.000
Alligator_sinensis_CCG005309.1
Alligator sinensis
Alligator_sinensis_CCG005309.1
I
0.000
Brh_R011794
Buceros rhinoceros
Brh_R011794
I
0.000
ENSBTAP00000027016-D1
Bos grunniens
ENSBTAP00000027016-D1
I
0.000
ENSP00000226574
Macaca fascicularis
ENSP00000226574
I
0.000
Gfo_R000994
Geospiza fortis
Gfo_R000994
I
0.000
Myotis_brandtii_NFKB1_10013135
Myotis brandtii
Myotis_brandtii_NFKB1_10013135
I
0.000
Ogr10707
Ophisaurus gracilis
Ogr10707
I
0.000
Pvit_05196
Pogona vitticeps
Pvit_05196
I
0.000
Tal_R004861
Tyto alba
Tal_R004861
I
0.000
nfkb1
Xenopus tropicalis
XB-GENE-985746
I
0.000
nfkb1.L
Xenopus laevis
XB-GENE-985749
I
0.000
NFKB1
Gallus gallus
ENSGALG00000012304
I
0.000
ENSAMXG00000003341
Astyanax mexicanus
ENSAMXG00000003341
I
0.000
ENSAPLG00000013878
Anas platyrhynchos
ENSAPLG00000013878
I
0.000
NFKB1
Bos taurus
ENSBTAG00000020270
I
0.000
NFKB1
Canis familiaris
ENSCAFG00000010730
I
0.000
NFKB1
Callithrix jacchus
ENSCJAG00000015382
I
0.000
NFKB1
Cavia porcellus
ENSCPOG00000007789
I
0.000
ENSCSAG00000004049
Chlorocebus sabaeus
ENSCSAG00000004049
I
0.000
nfkb1
Danio rerio
ENSDARG00000105261
I
0.000
NFKB1
Dasypus novemcinctus
ENSDNOG00000006855
I
0.000
Nfkb1
Dipodomys ordii
ENSDORG00000007447
I
0.000
NFKB1
Equus caballus
ENSECAG00000015042
I
0.000
ENSFALG00000008136
Ficedula albicollis
ENSFALG00000008136
I
0.000
NFKB1
Felis catus
ENSFCAG00000007557
I
0.000
NFKB1
Oryctolagus cuniculus
ENSOCUG00000021712
I
0.000
NFKB1
Gorilla gorilla
ENSGGOG00000009071
I
0.000
ENSLACG00000002751
Latimeria chalumnae
ENSLACG00000002751
I
0.000
NFKB1
Loxodonta africana
ENSLAFG00000009344
I
0.000
ENSLOCG00000012080
Lepisosteus oculatus
ENSLOCG00000012080
I
0.000
ENSMEUG00000001334
Macropus eugenii
ENSMEUG00000001334
I
0.000
NFKB1
Meleagris gallopavo
ENSMGAG00000011299
I
0.000
NFKB1
Myotis lucifugus
ENSMLUG00000005986
I
0.000
NFKB1
Macaca mulatta
ENSMMUG00000003736
I
0.000
NFKB1
Monodelphis domestica
ENSMODG00000020672
I
0.000
ENSMPUG00000009413
Mustela putorius furo
ENSMPUG00000009413
I
0.000
ENSNLEG00000013325
Nomascus leucogenys
ENSNLEG00000013325
I
0.000
ENSOANG00000028755
Ornithorhynchus anatinus
ENSOANG00000028755
I
0.000
ENSAMEG00000008882
Ailuropoda melanoleuca
ENSAMEG00000008882
I
0.000