Pavir.J37640 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.J37640 T024000_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J37640.1.p B3 67 169

Links

Other B3 family TFs
Other Panicum virgatum TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GH23748 Drosophila grimshawi FBgn0131205 N 0.000
L798_01241 Zootermopsis nevadensis L798_01241 N 0.000
ISCW018625 Ixodes scapularis ISCW018625 N 0.000
HelroG63031 Helobdella robusta HelroG63031 N 0.000
trh Drosophila melanogaster FBgn0262139 N 0.000
GE21022 Drosophila yakuba FBgn0238304 N 0.000
GK20151 Drosophila willistoni FBgn0222148 N 0.000
GJ12482 Drosophila virilis FBgn0199724 N 0.000
GD25707 Drosophila simulans FBgn0196992 N 0.000
GI16736 Drosophila mojavensis FBgn0139484 N 0.000
LotgiG127403 Lottia gigantea LotgiG127403 N 0.000
GH15456 Drosophila grimshawi FBgn0122928 N 0.000
GG14662 Drosophila erecta FBgn0106918 N 0.000
GF24890 Drosophila ananassae FBgn0101882 N 0.000
GA19928 Drosophila pseudoobscura FBgn0079924 N 0.000
trh Drosophila sechellia FBgn0025046 N 0.000
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N 0.000
NPAS1 Tursiops truncatus ENSTTRG00000011416 N 0.000
npas1 Takifugu rubripes ENSTRUG00000012318 N 0.000
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N 0.000
ENSP00000405290 Macaca fascicularis ENSP00000405290 N 0.000
SPER_0003947801 Spirometra erinaceieuropaei SPER_0003947801 N 0.000
MDOA009035 Musca domestica MDOA009035 N 0.000
BGLB001139 Biomphalaria glabrata BGLB001139 N 0.000
LDEC011477 Leptinotarsa decemlineata LDEC011477 N 0.000
LCUP010821 Lucilia cuprina LCUP010821 N 0.000
CLEC007310 Cimex lectularius CLEC007310 N 0.000
Ocbimv22029779m.g Octopus bimaculoides Ocbimv22029779m.g N 0.000
gw.84.113.1 Branchiostoma floridae gw.84.113.1 N 0.000
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N 0.000
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N 0.000
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N 0.000
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N 0.000
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N 0.000
TC001448 Tribolium castaneum TC001448 N 0.000
SMAR015279 Strigamia maritima SMAR015279 N 0.000
PHUM613040 Pediculus humanus PHUM613040 N 0.000
NV13641 Nasonia vitripennis NV13641 N 0.000
MCINX015160 Melitaea cinxia MCINX015160 N 0.000
npas1 Danio rerio ENSDARG00000015876 N 0.000
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N 0.000
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N 0.000
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N 0.000
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N 0.000
NPAS1 Gorilla gorilla ENSGGOG00000013398 N 0.000
npas1 Gasterosteus aculeatus ENSGACG00000009494 N 0.000
NPAS1 Homo sapiens ENSG00000130751 N 0.000
NPAS1 Felis catus ENSFCAG00000004833 N 0.000
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N 0.000
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N 0.000
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N 0.000
NPAS1 Cavia porcellus ENSCPOG00000023069 N 0.000
NPAS1 Callithrix jacchus ENSCJAG00000011666 N 0.000
NPAS1 Canis familiaris ENSCAFG00000032405 N 0.000
NPAS1 Bos taurus ENSBTAG00000015576 N 0.000
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N 0.000
DAPPUDRAFT_59022 Daphnia pulex DAPPUDRAFT_59022 N 0.000
CGI_10014877 Crassostrea gigas CGI_10014877 N 0.000
ACYPI001635 Acyrthosiphon pisum ACYPI001635 N 0.000
NPAS1 Ochotona princeps ENSOPRG00000014860 N 0.000
Npas1 Rattus norvegicus ENSRNOG00000015376 N 0.000
NPAS1 Pan troglodytes ENSPTRG00000011199 N 0.000
ENSPPYG00000010165 Pongo abelii ENSPPYG00000010165 N 0.000
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N 0.000
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N 0.000
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N 0.000
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N 0.000
NPAS3 Oryzias latipes ENSORLG00000018065 N 0.000
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N 0.000
ACEP14936 Atta cephalotes ACEP14936 N 0.000
NPAS1 Otolemur garnettii ENSOGAG00000012829 N 0.000
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N 0.000
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N 0.000
Npas1 Mus musculus ENSMUSG00000001988 N 0.000
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N 0.000
NPAS1 Monodelphis domestica ENSMODG00000009053 N 0.000
NPAS1 Macaca mulatta ENSMMUG00000011330 N 0.000
NPAS1 Microcebus murinus ENSMICG00000006346 N 0.000