chr1.CM0147.220.nd (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 chr1.CM0147.220.nd T024381_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0147.220.nd B3 610 711

Links

Other B3 family TFs
Other Lotus japonicus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 0.918
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.866
TCM_003056 Theobroma cacao TCM_003056 N 0.928
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.845
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.928
Ca_21518 Cicer arietinum Ca_21518 N 0.990
Cla015213 Citrullus lanatus Cla015213 N 0.888
Pm020417 Prunus mume Pm020417 N 0.959
30204.m001803 Ricinus communis 30204.m001803 N 0.928
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.866
cassava34238.m1 Manihot esculenta cassava34238.m1 N 0.907
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.969
mgf023017m Mimulus guttatus mgf023017m N 0.897
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.876
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 0.918
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 0.918
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.835
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.938
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.819
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.928
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.905
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.938
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.938
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.948
MDP0000166580 Malus domestica MDP0000166580 N 0.843
MDP0000309680 Malus domestica MDP0000309680 N 0.959
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.928
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.923
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.887
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.948
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 0.918
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.765
OB01G50120 Oryza brachyantha OB01G50120 N 0.887
ABI3 Arabidopsis thaliana AT3G24650 N 0.918
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.867
Bo3g083650 Brassica oleracea Bo3g083650 N 0.907
Bra013248 Brassica rapa Bra013248 N 0.907
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.887
F775_43744 Aegilops tauschii F775_43744 N 0.845
ABI3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3002399 N 0.918
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.980
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.980
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.887
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.938
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.938
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.857
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.845
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.990
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.938
OBART01G41410 Oryza barthii OBART01G41410 N 0.867
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.867
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.823
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.823
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.867
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.867
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.867
VP1 Oryza sativa OS01G0911700 N 0.816
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.876
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.866
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.948
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.959
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.897
Si000497m.g Setaria italica Si000497m.g N 0.887