ABI3 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh1_pg.C_scaffold_3002399 T019170_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_3002399 B3 576 677

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABI3 Arabidopsis thaliana AT3G24650 N 1.000
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 1.000
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 1.000
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 1.000
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 1.000
Bo3g083650 Brassica oleracea Bo3g083650 N 0.990
Bra013248 Brassica rapa Bra013248 N 0.990
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.990
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.979
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.979
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.969
TCM_003056 Theobroma cacao TCM_003056 N 0.969
30204.m001803 Ricinus communis 30204.m001803 N 0.969
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.969
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.948
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.948
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.948
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.938
cassava34238.m1 Manihot esculenta cassava34238.m1 N 0.938
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.928
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.928
Ca_21518 Cicer arietinum Ca_21518 N 0.928
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.928
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.918
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.918
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.918
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.918
MDP0000309680 Malus domestica MDP0000309680 N 0.918
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.918
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.907
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.907
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.907
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.907
Pm020417 Prunus mume Pm020417 N 0.907
mgf023017m Mimulus guttatus mgf023017m N 0.907
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.907
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.895
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.887
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.887
OB01G50120 Oryza brachyantha OB01G50120 N 0.887
Si000497m.g Setaria italica Si000497m.g N 0.887
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.887
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.887
Cla015213 Citrullus lanatus Cla015213 N 0.878
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.876
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.876
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.867
OBART01G41410 Oryza barthii OBART01G41410 N 0.867
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.867
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.867
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.867
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.867
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.857
F775_43744 Aegilops tauschii F775_43744 N 0.856
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.856
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.856
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.856
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.831
VP1 Oryza sativa OS01G0911700 N 0.816
MDP0000166580 Malus domestica MDP0000166580 N 0.809
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.802
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.802
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.755