CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g057480
(
Brassica oleracea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bo2g057480
T024528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g057480.1
BBR
39
315
MDEDGLSNRDWGYYDQSQFRPSLGFQLIPSIVDRNEKQFLCPQNPNFITTNNSYCGGGSSSSNVMSFPRDYTSSDAPFMSYSWLNQHRDSKFFNNLPNPSNHHTLLDPRAQPMQLLQIPKPEAGEVYESLKRRQCGGGQRADPKAKKERKLKDNIVPRMQRERSPLRKSIEMVINGVTIDIGCLPVPVCSCTGLSQQCYRWGCGGWQSACCTTNVSMFPLPMNTKKRGARIAGRKMSQGAFKKVLEKLSADGFDFSNPIDLKSHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Brassica oleracea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
jazf1b
Takifugu rubripes
ENSTRUG00000015434
N
ENSPFOG00000002162
Poecilia formosa
ENSPFOG00000002162
N
ENSPFOG00000004320
Poecilia formosa
ENSPFOG00000004320
N
ENSPPYG00000017691
Pongo abelii
ENSPPYG00000017691
N
JAZF1
Pan troglodytes
ENSPTRG00000019027
N
Jazf1
Rattus norvegicus
ENSRNOG00000027026
N
JAZF1
Sus scrofa
ENSSSCG00000016691
N
ENSSTOG00000005946
Ictidomys tridecemlineatus
ENSSTOG00000005946
N
JAZF1
Taeniopygia guttata
ENSTGUG00000002953
N
jazf1a
Tetraodon nigroviridis
ENSTNIG00000009204
N
jazf1b
Tetraodon nigroviridis
ENSTNIG00000018430
N
ENSPCAG00000012434
Procavia capensis
ENSPCAG00000012434
N
jazf1a
Takifugu rubripes
ENSTRUG00000018220
N
ENSTSYG00000007474
Tarsius syrichta
ENSTSYG00000007474
N
JAZF1
Tursiops truncatus
ENSTTRG00000015292
N
ENSXMAG00000013895
Xiphophorus maculatus
ENSXMAG00000013895
N
Brh_R011697
Buceros rhinoceros
Brh_R011697
N
Cmyd_10020957
Chelonia mydas
Cmyd_10020957
N
Myotis_brandtii_JAZF1_10034022
Myotis brandtii
Myotis_brandtii_JAZF1_10034022
N
Tal_R005424
Tyto alba
Tal_R005424
N
jazf1
Xenopus tropicalis
XB-GENE-950886
N
ENSGALG00000011126
Gallus gallus
ENSGALG00000011126
N
ENSAPLG00000014482
Anas platyrhynchos
ENSAPLG00000014482
N
ENSBTAG00000019024
Bos taurus
ENSBTAG00000019024
N
JAZF1
Callithrix jacchus
ENSCJAG00000008331
N
ENSCSAG00000014355
Chlorocebus sabaeus
ENSCSAG00000014355
N
jazf1b
Danio rerio
ENSDARG00000056793
N
jazf1a
Danio rerio
ENSDARG00000102551
N
ENSETEG00000002956
Echinops telfairi
ENSETEG00000002956
N
ENSFCAG00000023035
Felis catus
ENSFCAG00000023035
N
JAZF1
Homo sapiens
ENSG00000153814
N
jazf1b
Gasterosteus aculeatus
ENSGACG00000008216
N
ENSAMXG00000000627
Astyanax mexicanus
ENSAMXG00000000627
N
JAZF1
Gorilla gorilla
ENSGGOG00000011408
N
ENSLACG00000009439
Latimeria chalumnae
ENSLACG00000009439
N
ENSLOCG00000011888
Lepisosteus oculatus
ENSLOCG00000011888
N
ENSMGAG00000010727
Meleagris gallopavo
ENSMGAG00000010727
N
ENSMLUG00000013130
Myotis lucifugus
ENSMLUG00000013130
N
Jazf1
Mus musculus
ENSMUSG00000063568
N
JAZF1
Otolemur garnettii
ENSOGAG00000029759
N
ENSONIG00000002950
Oreochromis niloticus
ENSONIG00000002950
N
jazf1b
Oryzias latipes
ENSORLG00000007516
N